RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CPLX1O14810 134 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 CCP110O43303 1012 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 NCAPHQ15003 741 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 FAM53CQ9NYF3 392 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 TUBE1Q9UJT0 475 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
SNF8-203ENST00000504000 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 ANTXR2P58335 489 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 E4F1Q66K89 784 aaPredicted RBP17.37■□□□□ 0.37
SNF8-203ENST00000504000 RALYLQ86SE5 291 aaKnown RBP17.37■□□□□ 0.37
SNF8-203ENST00000504000 ELOA2Q8IYF1 753 aaPredicted RBP17.37■□□□□ 0.37
SNF8-203ENST00000504000 ZNF592Q92610 1267 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
SNF8-203ENST00000504000 XPO4Q9C0E2 1151 aaKnown RBP17.37■□□□□ 0.37
SNF8-203ENST00000504000 TNS2Q63HR2 1409 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 ZNF213O14771 459 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 CDKL5O76039 1030 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNF8-203ENST00000504000 FAM193AP78312 1265 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
SNF8-203ENST00000504000 JMYQ8N9B5 988 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 ZNF594Q96JF6 807 aaPredicted RBP17.36■□□□□ 0.37
SNF8-203ENST00000504000 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
SNF8-203ENST00000504000 ATRNO75882 1429 aa17.36■□□□□ 0.37
SNF8-203ENST00000504000 POLR3DP05423 398 aaPredicted RBP17.35■□□□□ 0.37
SNF8-203ENST00000504000 CSF1RP07333 972 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 PUS3Q9BZE2 481 aaKnown RBP17.35■□□□□ 0.37
SNF8-203ENST00000504000 IFNKQ9P0W0 207 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 C4AP0C0L4 1744 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 PFKFB1P16118 471 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 TCIRG1Q13488 830 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 ARMCX5Q6P1M9 558 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNF8-203ENST00000504000 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.35■□□□□ 0.37
SNF8-203ENST00000504000 ZMYM6O95789 1325 aa17.35■□□□□ 0.37
SNF8-203ENST00000504000 CBFA2T2O43439 604 aa17.34■□□□□ 0.37
SNF8-203ENST00000504000 ATF3P18847 181 aa17.34■□□□□ 0.37
SNF8-203ENST00000504000 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
SNF8-203ENST00000504000 PPP1R13BQ96KQ4 1090 aa17.34■□□□□ 0.37
SNF8-203ENST00000504000 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
SNF8-203ENST00000504000 ANGEL1Q9UNK9 670 aaKnown RBP17.34■□□□□ 0.37
SNF8-203ENST00000504000 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.37
SNF8-203ENST00000504000 A0A087WWV3 80 aa17.33■□□□□ 0.37
SNF8-203ENST00000504000 GPAA1O43292 621 aa17.33■□□□□ 0.37
SNF8-203ENST00000504000 SMC2O95347 1197 aa17.33■□□□□ 0.37
SNF8-203ENST00000504000 PCCAP05165 728 aaPredicted RBP17.33■□□□□ 0.37
SNF8-203ENST00000504000 TRDNQ13061 729 aa17.33■□□□□ 0.37
SNF8-203ENST00000504000 OTUD7BQ6GQQ9 843 aa17.33■□□□□ 0.37
SNF8-203ENST00000504000 PUS7LQ9H0K6 701 aaKnown RBP17.33■□□□□ 0.37
SNF8-203ENST00000504000 TRMT1Q9NXH9 659 aaKnown RBP17.33■□□□□ 0.37
SNF8-203ENST00000504000 MYH7P12883 1935 aa17.33■□□□□ 0.36
SNF8-203ENST00000504000 KIF28PB7ZC32 967 aa17.33■□□□□ 0.36
SNF8-203ENST00000504000 A1BGP04217 495 aa17.33■□□□□ 0.36
SNF8-203ENST00000504000 NAA30Q147X3 362 aaPredicted RBP17.33■□□□□ 0.36
SNF8-203ENST00000504000 KMT5BQ4FZB7 885 aa17.33■□□□□ 0.36
SNF8-203ENST00000504000 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
SNF8-203ENST00000504000 TMC6Q7Z403 805 aa17.33■□□□□ 0.36
SNF8-203ENST00000504000 ZCRB1Q8TBF4 217 aaKnown RBP17.33■□□□□ 0.36
SNF8-203ENST00000504000 ERCC4Q92889 916 aaPredicted RBP17.33■□□□□ 0.36
SNF8-203ENST00000504000 SPATA31A3Q5VYP0 1347 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 SYKP43405 635 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 HAND2P61296 217 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 FANCCQ00597 558 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
SNF8-203ENST00000504000 FCHSD1Q86WN1 690 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 TMEM87BQ96K49 555 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 TMX1Q9H3N1 280 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
SNF8-203ENST00000504000 PHLPP2Q6ZVD8 1323 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
SNF8-203ENST00000504000 ADORA1P30542 326 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 ZAP70P43403 619 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 UBE3CQ15386 1083 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 CREBRFQ8IUR6 639 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 WDR17Q8IZU2 1322 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 ADD2P35612 726 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 MYL5Q02045 173 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 PTPAQ15257 358 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 RESP18Q5W5W9 173 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 HSD3B7Q9H2F3 369 aa17.31■□□□□ 0.36
SNF8-203ENST00000504000 CDHR2Q9BYE9 1310 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 STK36Q9NRP7 1315 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 SH2B2O14492 632 aaPredicted RBP17.3■□□□□ 0.36
SNF8-203ENST00000504000 PPFIA3O75145 1194 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
SNF8-203ENST00000504000 IFIT5Q13325 482 aaKnown RBP17.3■□□□□ 0.36
SNF8-203ENST00000504000 SCARF1Q14162 830 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 SGMS1Q86VZ5 419 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 VPS37DQ86XT2 251 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 ZBTB38Q8NAP3 1195 aaPredicted RBP17.3■□□□□ 0.36
SNF8-203ENST00000504000 MAP3K14Q99558 947 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 ALG1Q9BT22 464 aa17.3■□□□□ 0.36
SNF8-203ENST00000504000 SRRTQ9BXP5 876 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms