RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 LIN7BQ9HAP6 207 aa6.18□□□□□ -1.42
PSPC1-205ENST00000497722 GNEQ9Y223 722 aaKnown RBP6.18□□□□□ -1.42
PSPC1-205ENST00000497722 HMX2A2RU54 273 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 ITPKAP23677 461 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 PDE4CQ08493 712 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 NFIAQ12857 509 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 PDE3BQ13370 1112 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 RNF43Q68DV7 783 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 ALKBH8Q96BT7 664 aaKnown RBP6.17□□□□□ -1.42
PSPC1-205ENST00000497722 RBCK1Q9BYM8 510 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 CLEC4MQ9H2X3 399 aaPredicted RBP6.17□□□□□ -1.42
PSPC1-205ENST00000497722 HIF3AQ9Y2N7 669 aa6.17□□□□□ -1.42
PSPC1-205ENST00000497722 PRR19A6NJB7 356 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 SOWAHDA6NJG2 315 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 CPNE3O75131 537 aaKnown RBP6.16□□□□□ -1.42
PSPC1-205ENST00000497722 ADAMTS4O75173 837 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 WNT11O96014 354 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 NEFLP07196 543 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 CTSBP07858 339 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 BMP3P12645 472 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 PCDH1Q08174 1060 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 DNAJC25Q9H1X3 360 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 ADGRE2Q9UHX3 823 aa6.16□□□□□ -1.42
PSPC1-205ENST00000497722 EIF1AYO14602 144 aaKnown RBP6.15□□□□□ -1.42
PSPC1-205ENST00000497722 B3GALT4O96024 378 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 C8AP07357 584 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 EXOSC6Q5RKV6 272 aaKnown RBP6.15□□□□□ -1.42
PSPC1-205ENST00000497722 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 PRPF40BQ6NWY9 871 aaKnown RBP6.15□□□□□ -1.42
PSPC1-205ENST00000497722 BEND4Q6ZU67 534 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 DTX1Q86Y01 620 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 GLIS3Q8NEA6 775 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 CCER1Q8TC90 406 aaPredicted RBP6.15□□□□□ -1.42
PSPC1-205ENST00000497722 DBNDD2Q9BQY9 259 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 TRIM56Q9BRZ2 755 aaKnown RBP6.15□□□□□ -1.42
PSPC1-205ENST00000497722 ZNF576Q9H609 170 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 ABCB6Q9NP58 842 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 NPHS2Q9NP85 383 aa6.15□□□□□ -1.42
PSPC1-205ENST00000497722 EIF4EBP3O60516 100 aaPredicted RBP6.14□□□□□ -1.43
PSPC1-205ENST00000497722 GSTM4Q03013 218 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 PTPN12Q05209 780 aaKnown RBP6.14□□□□□ -1.43
PSPC1-205ENST00000497722 SGO2Q562F6 1265 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 NUTM2GQ5VZR2 741 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 FDX2Q6P4F2 183 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 POU5F2Q8N7G0 328 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 C2CD4AQ8NCU7 369 aaPredicted RBP6.14□□□□□ -1.43
PSPC1-205ENST00000497722 CCDC74AQ96AQ1 378 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 USP26Q9BXU7 913 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 NIF3L1Q9GZT8 377 aa6.14□□□□□ -1.43
PSPC1-205ENST00000497722 SART1O43290 800 aaKnown RBP6.13□□□□□ -1.43
PSPC1-205ENST00000497722 BRD1O95696 1058 aa6.13□□□□□ -1.43
PSPC1-205ENST00000497722 DRD2P14416 443 aa6.13□□□□□ -1.43
PSPC1-205ENST00000497722 DMRTB1Q96MA1 342 aa6.13□□□□□ -1.43
PSPC1-205ENST00000497722 CSRNP1Q96S65 589 aa6.13□□□□□ -1.43
PSPC1-205ENST00000497722 CYP4F12Q9HCS2 524 aa6.13□□□□□ -1.43
PSPC1-205ENST00000497722 ECEL1O95672 775 aa6.12□□□□□ -1.43
PSPC1-205ENST00000497722 MAP4P27816 1152 aaKnown RBP6.12□□□□□ -1.43
PSPC1-205ENST00000497722 SOX4Q06945 474 aaPredicted RBP6.12□□□□□ -1.43
PSPC1-205ENST00000497722 DSC3Q14574 896 aa6.12□□□□□ -1.43
PSPC1-205ENST00000497722 CDPF1Q6NVV7 123 aa6.12□□□□□ -1.43
PSPC1-205ENST00000497722 TMC7Q7Z402 723 aa6.12□□□□□ -1.43
PSPC1-205ENST00000497722 C12orf50Q8NA57 414 aaPredicted RBP6.12□□□□□ -1.43
PSPC1-205ENST00000497722 EZH1Q92800 747 aaPredicted RBP6.12□□□□□ -1.43
PSPC1-205ENST00000497722 EHD4Q9H223 541 aa6.12□□□□□ -1.43
PSPC1-205ENST00000497722 GSX1Q9H4S2 264 aaPredicted RBP6.12□□□□□ -1.43
PSPC1-205ENST00000497722 MAOBP27338 520 aa6.11□□□□□ -1.43
PSPC1-205ENST00000497722 GRM2Q14416 872 aa6.11□□□□□ -1.43
PSPC1-205ENST00000497722 RPS26P11Q5JNZ5 115 aaPredicted RBP6.11□□□□□ -1.43
PSPC1-205ENST00000497722 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
PSPC1-205ENST00000497722 EPS8L3Q8TE67 593 aaKnown RBP6.11□□□□□ -1.43
PSPC1-205ENST00000497722 KCNF1Q9H3M0 494 aa6.11□□□□□ -1.43
PSPC1-205ENST00000497722 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 TMEM238LA0A1B0GVL6 79 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 CYP11A1P05108 521 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 ADH5P11766 374 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 FAAP100Q0VG06 881 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 POU4F3Q15319 338 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 SHISA5Q8N114 240 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 GATA6Q92908 595 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 ASIC4Q96FT7 647 aa6.1□□□□□ -1.43
PSPC1-205ENST00000497722 GAS2O43903 313 aaKnown RBP6.09□□□□□ -1.43
PSPC1-205ENST00000497722 F13BP05160 661 aa6.09□□□□□ -1.43
PSPC1-205ENST00000497722 FBLIM1Q8WUP2 373 aa6.09□□□□□ -1.43
PSPC1-205ENST00000497722 DCTN4Q9UJW0 460 aa6.09□□□□□ -1.43
PSPC1-205ENST00000497722 ACTL7BQ9Y614 415 aa6.09□□□□□ -1.43
PSPC1-205ENST00000497722 TREHO43280 583 aa6.08□□□□□ -1.44
PSPC1-205ENST00000497722 PI16Q6UXB8 463 aa6.08□□□□□ -1.44
PSPC1-205ENST00000497722 MFSD14AQ96MC6 490 aa6.08□□□□□ -1.44
PSPC1-205ENST00000497722 FAM95CA0A1B0GW59 222 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 WDR64B1ANS9 1081 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 HOXA10P31260 410 aaPredicted RBP6.07□□□□□ -1.44
PSPC1-205ENST00000497722 ADMP35318 185 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 ENOX2Q16206 610 aaKnown RBP6.07□□□□□ -1.44
PSPC1-205ENST00000497722 SEZ6L2Q6UXD5 910 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 ABI1Q8IZP0 508 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 TMC1Q8TDI8 760 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 ACSS3Q9H6R3 686 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 PRKAG2Q9UGJ0 569 aa6.07□□□□□ -1.44
PSPC1-205ENST00000497722 TRAK1Q9UPV9 953 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms