RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.16□□□□□ -1.1
SORT1-207ENST00000493736 C12orf50Q8NA57 414 aaPredicted RBP8.16□□□□□ -1.1
SORT1-207ENST00000493736 ALKBH8Q96BT7 664 aaKnown RBP8.16□□□□□ -1.1
SORT1-207ENST00000493736 DCTN4Q9UJW0 460 aa8.16□□□□□ -1.1
SORT1-207ENST00000493736 CADPSQ9ULU8 1353 aa8.16□□□□□ -1.1
SORT1-207ENST00000493736 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
SORT1-207ENST00000493736 EXOSC6Q5RKV6 272 aaKnown RBP8.15□□□□□ -1.1
SORT1-207ENST00000493736 FAM20CQ8IXL6 584 aa8.15□□□□□ -1.1
SORT1-207ENST00000493736 DDX54Q8TDD1 881 aaKnown RBP8.15□□□□□ -1.1
SORT1-207ENST00000493736 CSRNP1Q96S65 589 aa8.15□□□□□ -1.1
SORT1-207ENST00000493736 TMPRSS13Q9BYE2 586 aa8.15□□□□□ -1.1
SORT1-207ENST00000493736 C7orf69Q9H7B7 122 aa8.15□□□□□ -1.1
SORT1-207ENST00000493736 HIF3AQ9Y2N7 669 aa8.15□□□□□ -1.1
SORT1-207ENST00000493736 TMC7Q7Z402 723 aa8.14□□□□□ -1.11
SORT1-207ENST00000493736 NBPF11Q86T75 865 aa8.14□□□□□ -1.11
SORT1-207ENST00000493736 CLEC10AQ8IUN9 316 aa8.14□□□□□ -1.11
SORT1-207ENST00000493736 TRIM42Q8IWZ5 723 aa8.14□□□□□ -1.11
SORT1-207ENST00000493736 CFTRP13569 1480 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 HMX2A2RU54 273 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 CYP11A1P05108 521 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 MAPK1P28482 360 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 NFIAQ12857 509 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 BEND4Q6ZU67 534 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 SMG8Q8ND04 991 aaKnown RBP8.13□□□□□ -1.11
SORT1-207ENST00000493736 ZNF576Q9H609 170 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 SUGCTQ9HAC7 445 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
SORT1-207ENST00000493736 HYAL3O43820 417 aaPredicted RBP8.12□□□□□ -1.11
SORT1-207ENST00000493736 DLGAP3O95886 979 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 ITPKAP23677 461 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 RXRBP28702 533 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 POU4F3Q15319 338 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
SORT1-207ENST00000493736 RNF43Q68DV7 783 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 FAM83CQ9BQN1 747 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 ZFYVE1Q9HBF4 777 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
SORT1-207ENST00000493736 B3GALT4O96024 378 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 MAOBP27338 520 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 PRPF40BQ6NWY9 871 aaKnown RBP8.11□□□□□ -1.11
SORT1-207ENST00000493736 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
SORT1-207ENST00000493736 DBNDD2Q9BQY9 259 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 NRSN2Q9GZP1 204 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 ABCB6Q9NP58 842 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 NLRP2Q9NX02 1062 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 IVNS1ABPQ9Y6Y0 642 aa8.11□□□□□ -1.11
SORT1-207ENST00000493736 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 TIAF1O95411 115 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 DRD2P14416 443 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 MAP4P27816 1152 aaKnown RBP8.1□□□□□ -1.11
SORT1-207ENST00000493736 USP11P51784 963 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
SORT1-207ENST00000493736 KCNA1Q09470 495 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 SGO2Q562F6 1265 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 PDS5BQ9NTI5 1447 aa8.1□□□□□ -1.11
SORT1-207ENST00000493736 SSTR4P31391 388 aa8.09□□□□□ -1.11
SORT1-207ENST00000493736 PLCB3Q01970 1234 aa8.09□□□□□ -1.11
SORT1-207ENST00000493736 GRM2Q14416 872 aa8.09□□□□□ -1.11
SORT1-207ENST00000493736 RAD18Q9NS91 495 aa8.09□□□□□ -1.11
SORT1-207ENST00000493736 TGFB1P01137 390 aa8.08□□□□□ -1.12
SORT1-207ENST00000493736 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
SORT1-207ENST00000493736 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
SORT1-207ENST00000493736 DTHD1Q6ZMT9 781 aa8.08□□□□□ -1.12
SORT1-207ENST00000493736 ZDHHC13Q8IUH4 622 aa8.08□□□□□ -1.12
SORT1-207ENST00000493736 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
SORT1-207ENST00000493736 PCMTD2Q9NV79 361 aa8.08□□□□□ -1.12
SORT1-207ENST00000493736 FANCD2Q9BXW9 1451 aa8.07□□□□□ -1.12
SORT1-207ENST00000493736 PNMA6FA0A0J9YX94 578 aa8.07□□□□□ -1.12
SORT1-207ENST00000493736 CTSBP07858 339 aa8.07□□□□□ -1.12
SORT1-207ENST00000493736 GLIS3Q8NEA6 775 aa8.07□□□□□ -1.12
SORT1-207ENST00000493736 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
SORT1-207ENST00000493736 NESP48681 1621 aa8.07□□□□□ -1.12
SORT1-207ENST00000493736 PRDM2Q13029 1718 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 WRNQ14191 1432 aaPredicted RBP eCLIP8.06□□□□□ -1.12
SORT1-207ENST00000493736 FAM95CA0A1B0GW59 222 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 TREHO43280 583 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 COBLO75128 1261 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 ADH5P11766 374 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 GRIK1P39086 918 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 ZNF157P51786 506 aaPredicted RBP8.06□□□□□ -1.12
SORT1-207ENST00000493736 FCGRTP55899 365 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 AP3B2Q13367 1082 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 DSC3Q14574 896 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 AKAP4Q5JQC9 854 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 PAOXQ6QHF9 649 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 PI16Q6UXB8 463 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 ZSCAN29Q8IWY8 852 aaPredicted RBP8.06□□□□□ -1.12
SORT1-207ENST00000493736 C2CD4AQ8NCU7 369 aaPredicted RBP8.06□□□□□ -1.12
SORT1-207ENST00000493736 GIMAP7Q8NHV1 300 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 SHKBP1Q8TBC3 707 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 MFSD14AQ96MC6 490 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 CEP164Q9UPV0 1460 aa8.06□□□□□ -1.12
SORT1-207ENST00000493736 ECEL1O95672 775 aa8.05□□□□□ -1.12
SORT1-207ENST00000493736 CD97P48960 835 aa8.05□□□□□ -1.12
SORT1-207ENST00000493736 CDPF1Q6NVV7 123 aa8.05□□□□□ -1.12
SORT1-207ENST00000493736 FBLIM1Q8WUP2 373 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms