RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 PPP4R2Q9NY27 417 aa6.13□□□□□ -1.43
SFPQ-209ENST00000485454 B3GALT4O96024 378 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 CYP11A1P05108 521 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 MAPK8P45983 427 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 PREPP48147 710 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 RPS26P11Q5JNZ5 115 aaPredicted RBP6.12□□□□□ -1.43
SFPQ-209ENST00000485454 NUTM2GQ5VZR2 741 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 PI16Q6UXB8 463 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 AEBP1Q8IUX7 1158 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 MYRFLQ96LU7 910 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 NRSN2Q9GZP1 204 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 SUGCTQ9HAC7 445 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 STOML1Q9UBI4 398 aa6.12□□□□□ -1.43
SFPQ-209ENST00000485454 DLGAP3O95886 979 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 FSTP19883 344 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 FMR1Q06787 632 aaKnown RBP eCLIP6.11□□□□□ -1.43
SFPQ-209ENST00000485454 POU4F3Q15319 338 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 DTHD1Q6ZMT9 781 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.11□□□□□ -1.43
SFPQ-209ENST00000485454 C12orf50Q8NA57 414 aaPredicted RBP6.11□□□□□ -1.43
SFPQ-209ENST00000485454 SMG8Q8ND04 991 aaKnown RBP6.11□□□□□ -1.43
SFPQ-209ENST00000485454 BCO2Q9BYV7 579 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 ZFYVE1Q9HBF4 777 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 HIF3AQ9Y2N7 669 aa6.11□□□□□ -1.43
SFPQ-209ENST00000485454 GSC2O15499 205 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 GAS2O43903 313 aaKnown RBP6.1□□□□□ -1.43
SFPQ-209ENST00000485454 BMP3P12645 472 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 MAOBP27338 520 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 FCGRTP55899 365 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.1□□□□□ -1.43
SFPQ-209ENST00000485454 HP1BP3Q5SSJ5 553 aaPredicted RBP6.1□□□□□ -1.43
SFPQ-209ENST00000485454 FAM20CQ8IXL6 584 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 FBF1Q8TES7 1133 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
SFPQ-209ENST00000485454 PCMTD2Q9NV79 361 aa6.1□□□□□ -1.43
SFPQ-209ENST00000485454 TIAF1O95411 115 aa6.09□□□□□ -1.43
SFPQ-209ENST00000485454 CTSBP07858 339 aa6.09□□□□□ -1.43
SFPQ-209ENST00000485454 XRCC5P13010 732 aaKnown RBP6.09□□□□□ -1.43
SFPQ-209ENST00000485454 NXPE4Q6UWF7 544 aa6.09□□□□□ -1.43
SFPQ-209ENST00000485454 CLEC10AQ8IUN9 316 aa6.09□□□□□ -1.43
SFPQ-209ENST00000485454 CORO1BQ9BR76 489 aa6.09□□□□□ -1.43
SFPQ-209ENST00000485454 IGLV1-40P01703 118 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 ZNF157P51786 506 aaPredicted RBP6.08□□□□□ -1.44
SFPQ-209ENST00000485454 ATP2B2Q01814 1243 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 FAAP100Q0VG06 881 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 AP3B2Q13367 1082 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 ALG1LQ6GMV1 187 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 BEND4Q6ZU67 534 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 SND1Q7KZF4 910 aaKnown RBP eCLIP6.08□□□□□ -1.44
SFPQ-209ENST00000485454 TRIM42Q8IWZ5 723 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 FAM83CQ9BQN1 747 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 KCNF1Q9H3M0 494 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 C7orf69Q9H7B7 122 aa6.08□□□□□ -1.44
SFPQ-209ENST00000485454 HMX2A2RU54 273 aa6.07□□□□□ -1.44
SFPQ-209ENST00000485454 ECEL1O95672 775 aa6.07□□□□□ -1.44
SFPQ-209ENST00000485454 SSTR4P31391 388 aa6.07□□□□□ -1.44
SFPQ-209ENST00000485454 SOX4Q06945 474 aaPredicted RBP6.07□□□□□ -1.44
SFPQ-209ENST00000485454 SETDB2Q96T68 719 aa6.07□□□□□ -1.44
SFPQ-209ENST00000485454 RAD18Q9NS91 495 aa6.07□□□□□ -1.44
SFPQ-209ENST00000485454 GPN3Q9UHW5 284 aaPredicted RBP6.07□□□□□ -1.44
SFPQ-209ENST00000485454 WWC3Q9ULE0 1092 aa6.07□□□□□ -1.44
SFPQ-209ENST00000485454 GIPC1O14908 333 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 P4HBP07237 508 aaKnown RBP6.06□□□□□ -1.44
SFPQ-209ENST00000485454 ADH5P11766 374 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 DRD2P14416 443 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 MAP4P27816 1152 aaKnown RBP6.06□□□□□ -1.44
SFPQ-209ENST00000485454 RXRBP28702 533 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 PPP2R3AQ06190 1150 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 NFIAQ12857 509 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 PDE3AQ14432 1141 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 SGO2Q562F6 1265 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 RNF43Q68DV7 783 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 KRTAP1-3Q8IUG1 177 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 C2CD4AQ8NCU7 369 aaPredicted RBP6.06□□□□□ -1.44
SFPQ-209ENST00000485454 SRCIN1Q9C0H9 1055 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 TMEM39AQ9NV64 488 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 AKAP2Q9Y2D5 859 aa6.06□□□□□ -1.44
SFPQ-209ENST00000485454 GSTT1P30711 240 aa6.05□□□□□ -1.44
SFPQ-209ENST00000485454 USP11P51784 963 aa6.05□□□□□ -1.44
SFPQ-209ENST00000485454 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
SFPQ-209ENST00000485454 DBNDD2Q9BQY9 259 aa6.05□□□□□ -1.44
SFPQ-209ENST00000485454 SPG7Q9UQ90 795 aa6.05□□□□□ -1.44
SFPQ-209ENST00000485454 AOC2O75106 756 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 LDHBP07195 334 aaKnown RBP6.04□□□□□ -1.44
SFPQ-209ENST00000485454 CD97P48960 835 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 AKAP4Q5JQC9 854 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 CDPF1Q6NVV7 123 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 C3orf58Q8NDZ4 430 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 WDR18Q9BV38 432 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 YIPF2Q9BWQ6 316 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 OSBPL7Q9BZF2 842 aa6.04□□□□□ -1.44
SFPQ-209ENST00000485454 SYNGAP1Q96PV0 1343 aa6.03□□□□□ -1.44
SFPQ-209ENST00000485454 FAM95CA0A1B0GW59 222 aa6.03□□□□□ -1.44
SFPQ-209ENST00000485454 ANKRD33BA6NCL7 494 aa6.03□□□□□ -1.44
SFPQ-209ENST00000485454 GSTP1P09211 210 aaKnown RBP6.03□□□□□ -1.44
SFPQ-209ENST00000485454 HNRNPUQ00839 825 aaKnown RBP eCLIP6.03□□□□□ -1.44
SFPQ-209ENST00000485454 COL19A1Q14993 1142 aa6.03□□□□□ -1.44
SFPQ-209ENST00000485454 MCTP1Q6DN14 999 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms