RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 BMP3P12645 472 aa11.3□□□□□ -0.6
UBR3-210ENST00000484596 FMR1Q06787 632 aaKnown RBP eCLIP11.3□□□□□ -0.6
UBR3-210ENST00000484596 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
UBR3-210ENST00000484596 NUTM2GQ5VZR2 741 aa11.3□□□□□ -0.6
UBR3-210ENST00000484596 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.3□□□□□ -0.6
UBR3-210ENST00000484596 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
UBR3-210ENST00000484596 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
UBR3-210ENST00000484596 EHD4Q9H223 541 aa11.3□□□□□ -0.6
UBR3-210ENST00000484596 GSC2O15499 205 aa11.29□□□□□ -0.6
UBR3-210ENST00000484596 CCDC74AQ96AQ1 378 aa11.29□□□□□ -0.6
UBR3-210ENST00000484596 EXOSC6Q5RKV6 272 aaKnown RBP11.28□□□□□ -0.6
UBR3-210ENST00000484596 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
UBR3-210ENST00000484596 C12orf50Q8NA57 414 aaPredicted RBP11.28□□□□□ -0.6
UBR3-210ENST00000484596 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
UBR3-210ENST00000484596 NRSN2Q9GZP1 204 aa11.28□□□□□ -0.6
UBR3-210ENST00000484596 BCL11AQ9H165 835 aa11.28□□□□□ -0.6
UBR3-210ENST00000484596 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
UBR3-210ENST00000484596 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
UBR3-210ENST00000484596 NFIAQ12857 509 aa11.27□□□□□ -0.61
UBR3-210ENST00000484596 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
UBR3-210ENST00000484596 BEND4Q6ZU67 534 aa11.27□□□□□ -0.61
UBR3-210ENST00000484596 SMG8Q8ND04 991 aaKnown RBP11.27□□□□□ -0.61
UBR3-210ENST00000484596 FAM83CQ9BQN1 747 aa11.27□□□□□ -0.61
UBR3-210ENST00000484596 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
UBR3-210ENST00000484596 MAPK8P45983 427 aa11.26□□□□□ -0.61
UBR3-210ENST00000484596 RANGAP1P46060 587 aaPredicted RBP11.26□□□□□ -0.61
UBR3-210ENST00000484596 RNF43Q68DV7 783 aa11.26□□□□□ -0.61
UBR3-210ENST00000484596 NBPF11Q86T75 865 aa11.26□□□□□ -0.61
UBR3-210ENST00000484596 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
UBR3-210ENST00000484596 CYP4F12Q9HCS2 524 aa11.26□□□□□ -0.61
UBR3-210ENST00000484596 GAS2O43903 313 aaKnown RBP11.25□□□□□ -0.61
UBR3-210ENST00000484596 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
UBR3-210ENST00000484596 TIAF1O95411 115 aa11.25□□□□□ -0.61
UBR3-210ENST00000484596 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
UBR3-210ENST00000484596 HIF3AQ9Y2N7 669 aa11.25□□□□□ -0.61
UBR3-210ENST00000484596 RBM47A0AV96 593 aaKnown RBP11.24□□□□□ -0.61
UBR3-210ENST00000484596 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
UBR3-210ENST00000484596 DRD2P14416 443 aa11.24□□□□□ -0.61
UBR3-210ENST00000484596 ITPKAP23677 461 aa11.24□□□□□ -0.61
UBR3-210ENST00000484596 ENOX2Q16206 610 aaKnown RBP11.24□□□□□ -0.61
UBR3-210ENST00000484596 ALG1LQ6GMV1 187 aa11.24□□□□□ -0.61
UBR3-210ENST00000484596 GADD45BO75293 160 aaPredicted RBP11.23□□□□□ -0.61
UBR3-210ENST00000484596 TGFB1P01137 390 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 MAOBP27338 520 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 SSTR4P31391 388 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 SGO2Q562F6 1265 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 FBXO33Q7Z6M2 555 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 ZDHHC13Q8IUH4 622 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 FBF1Q8TES7 1133 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
UBR3-210ENST00000484596 PNMA6FA0A0J9YX94 578 aa11.22□□□□□ -0.61
UBR3-210ENST00000484596 B3GALT4O96024 378 aa11.22□□□□□ -0.61
UBR3-210ENST00000484596 CTSBP07858 339 aa11.22□□□□□ -0.61
UBR3-210ENST00000484596 MAP4P27816 1152 aaKnown RBP11.22□□□□□ -0.61
UBR3-210ENST00000484596 EPS8L3Q8TE67 593 aaKnown RBP11.22□□□□□ -0.61
UBR3-210ENST00000484596 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
UBR3-210ENST00000484596 CYP11A1P05108 521 aa11.21□□□□□ -0.61
UBR3-210ENST00000484596 LDHBP07195 334 aaKnown RBP11.21□□□□□ -0.61
UBR3-210ENST00000484596 ITGAEP38570 1179 aa11.21□□□□□ -0.61
UBR3-210ENST00000484596 POU4F3Q15319 338 aa11.21□□□□□ -0.61
UBR3-210ENST00000484596 GIPC2Q8TF65 315 aa11.21□□□□□ -0.61
UBR3-210ENST00000484596 TRIM56Q9BRZ2 755 aaKnown RBP11.21□□□□□ -0.61
UBR3-210ENST00000484596 TMEM238LA0A1B0GVL6 79 aa11.2□□□□□ -0.62
UBR3-210ENST00000484596 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
UBR3-210ENST00000484596 CD97P48960 835 aa11.2□□□□□ -0.62
UBR3-210ENST00000484596 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
UBR3-210ENST00000484596 SOX4Q06945 474 aaPredicted RBP11.2□□□□□ -0.62
UBR3-210ENST00000484596 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
UBR3-210ENST00000484596 GLIS3Q8NEA6 775 aa11.2□□□□□ -0.62
UBR3-210ENST00000484596 PCMTD2Q9NV79 361 aa11.2□□□□□ -0.62
UBR3-210ENST00000484596 MED26O95402 600 aa11.19□□□□□ -0.62
UBR3-210ENST00000484596 ECEL1O95672 775 aa11.19□□□□□ -0.62
UBR3-210ENST00000484596 GRM2Q14416 872 aa11.19□□□□□ -0.62
UBR3-210ENST00000484596 C2CD4AQ8NCU7 369 aaPredicted RBP11.19□□□□□ -0.62
UBR3-210ENST00000484596 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
UBR3-210ENST00000484596 RXRBP28702 533 aa11.18□□□□□ -0.62
UBR3-210ENST00000484596 USP11P51784 963 aa11.18□□□□□ -0.62
UBR3-210ENST00000484596 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
UBR3-210ENST00000484596 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
UBR3-210ENST00000484596 SHKBP1Q8TBC3 707 aa11.18□□□□□ -0.62
UBR3-210ENST00000484596 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
UBR3-210ENST00000484596 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
UBR3-210ENST00000484596 PRR19A6NJB7 356 aa11.17□□□□□ -0.62
UBR3-210ENST00000484596 COBLO75128 1261 aa11.17□□□□□ -0.62
UBR3-210ENST00000484596 ZNF16P17020 682 aaPredicted RBP11.17□□□□□ -0.62
UBR3-210ENST00000484596 PI16Q6UXB8 463 aa11.17□□□□□ -0.62
UBR3-210ENST00000484596 FBLIM1Q8WUP2 373 aa11.17□□□□□ -0.62
UBR3-210ENST00000484596 MFSD14AQ96MC6 490 aa11.17□□□□□ -0.62
UBR3-210ENST00000484596 CORO1BQ9BR76 489 aa11.17□□□□□ -0.62
UBR3-210ENST00000484596 ADH5P11766 374 aa11.16□□□□□ -0.62
UBR3-210ENST00000484596 ZFYVE1Q9HBF4 777 aa11.16□□□□□ -0.62
UBR3-210ENST00000484596 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
UBR3-210ENST00000484596 XPCQ01831 940 aaPredicted RBP11.15□□□□□ -0.62
UBR3-210ENST00000484596 FAAP100Q0VG06 881 aa11.15□□□□□ -0.62
UBR3-210ENST00000484596 RPS26P11Q5JNZ5 115 aaPredicted RBP11.15□□□□□ -0.62
UBR3-210ENST00000484596 FAM95CA0A1B0GW59 222 aa11.14□□□□□ -0.63
UBR3-210ENST00000484596 WDR64B1ANS9 1081 aa11.14□□□□□ -0.63
UBR3-210ENST00000484596 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
UBR3-210ENST00000484596 NFKBIBQ15653 356 aa11.14□□□□□ -0.63
UBR3-210ENST00000484596 HP1BP3Q5SSJ5 553 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms