RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 KCNG1Q9UIX4 513 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 RAD50Q92878 1312 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 F6X3S4 739 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 ATP2C2O75185 946 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 ATP11AP98196 1134 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 LIN9Q5TKA1 542 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 CCDC114Q96M63 670 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 DKC1O60832 514 aaKnown RBP eCLIP10.71□□□□□ -0.69
VEGFA-212ENST00000480614 ADAMTS2O95450 1211 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 PLCD1P51178 756 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 BRF1Q92994 677 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 NOX5Q96PH1 765 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 TMOD4Q9NZQ9 345 aa10.71□□□□□ -0.69
VEGFA-212ENST00000480614 BAZ2BQ9UIF8 2168 aaKnown RBP10.71□□□□□ -0.69
VEGFA-212ENST00000480614 URB1O60287 2271 aaKnown RBP10.71□□□□□ -0.69
VEGFA-212ENST00000480614 GBP1P32455 592 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 DENND4BO75064 1496 aaPredicted RBP10.71□□□□□ -0.7
VEGFA-212ENST00000480614 USHBP1Q8N6Y0 703 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 KIFC2Q96AC6 838 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 HAUS7Q99871 368 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 PFDN4Q9NQP4 134 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 ACTN4O43707 911 aaKnown RBP10.71□□□□□ -0.7
VEGFA-212ENST00000480614 RAPGEF3O95398 923 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 RHPN1Q8TCX5 695 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 DTHD1Q6ZMT9 781 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 PAG1Q9NWQ8 432 aa10.71□□□□□ -0.7
VEGFA-212ENST00000480614 TTC31Q49AM3 519 aaPredicted RBP10.7□□□□□ -0.7
VEGFA-212ENST00000480614 CNNM4Q6P4Q7 775 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 CCDC62Q6P9F0 684 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 IQCDQ96DY2 449 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 NUF2Q9BZD4 464 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 AMOTL2Q9Y2J4 779 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 FANCAO15360 1455 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 FAM204AQ9H8W3 233 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 TMEM110-MUSTN1A8MSY1 372 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 WAPLQ7Z5K2 1190 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 SNRKQ9NRH2 765 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 CFAP43Q8NDM7 1665 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 NOS1P29475 1434 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 ARID5AQ03989 594 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 TMX3Q96JJ7 454 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
VEGFA-212ENST00000480614 CAPN2P17655 700 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 SDSP20132 328 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 GIMAP6Q6P9H5 292 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 MIPOL1Q8TD10 442 aa10.7□□□□□ -0.7
VEGFA-212ENST00000480614 UTP11Q9Y3A2 253 aaKnown RBP10.7□□□□□ -0.7
VEGFA-212ENST00000480614 PPIP5K1Q6PFW1 1433 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 NOLC1Q14978 699 aaKnown RBP eCLIP10.69□□□□□ -0.75e-26■□□□□ 10.1
VEGFA-212ENST00000480614 INTS4Q96HW7 963 aaKnown RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 I3L4J1 428 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 RAB3IPQ96QF0 476 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 TRPC3Q13507 836 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 TSNAXIP1Q2TAA8 658 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 KSR2Q6VAB6 950 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 BCAP29Q9UHQ4 241 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 PARP1P09874 1014 aaKnown RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 NOC2LQ9Y3T9 749 aaKnown RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 F13A1P00488 732 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 PTGS1P23219 599 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 AOPEPQ8N6M6 819 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 CNPY2Q9Y2B0 182 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 RPRD2Q5VT52 1461 aaKnown RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 CCDC25Q86WR0 208 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 CALUO43852 315 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 LGSNQ5TDP6 509 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 RAB11FIP4Q86YS3 637 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 CASQ2O14958 399 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 LMOD1P29536 600 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-212ENST00000480614 LMNTD2Q8IXW0 634 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 LZTS2Q9BRK4 669 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 CETN3O15182 167 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 SETSIPP0DME0 302 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.72e-42■□□□□ 11.1
VEGFA-212ENST00000480614 DHX58Q96C10 678 aa10.69□□□□□ -0.7
VEGFA-212ENST00000480614 AKR1B15C9JRZ8 316 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 USP48Q86UV5 1035 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 GJC1P36383 396 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 ITIH3Q06033 890 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 KCNK9Q9NPC2 374 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 BACH1O14867 736 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 DHX32Q7L7V1 743 aaKnown RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 PHLDB2Q86SQ0 1253 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 EPSTI1Q96J88 318 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 CAPZA3Q96KX2 299 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 ATP5J2-PTCD1G3V325 749 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 C16orf71Q8IYS4 520 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-212ENST00000480614 ABCC1P33527 1531 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 KRT28Q7Z3Y7 464 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 GRIN2AQ12879 1464 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 FOXO3O43524 673 aa10.68□□□□□ -0.7
VEGFA-212ENST00000480614 SYCE1Q8N0S2 351 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms