RNA–Protein interactions for RNA: ENST00000478946.1

STAMBP-208, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-208ENST00000478946 MAP3K6O95382 1288 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 CELA3AP09093 270 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 FAM160A1Q05DH4 1040 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 HYAL2Q12891 473 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 CAMK2GQ13555 558 aaPredicted RBP11.29□□□□□ -0.6
STAMBP-208ENST00000478946 PCNX4Q63HM2 1172 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 CEP120Q8N960 986 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 GAS2L1Q99501 681 aaPredicted RBP11.29□□□□□ -0.6
STAMBP-208ENST00000478946 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 PREX1Q8TCU6 1659 aa11.29□□□□□ -0.6
STAMBP-208ENST00000478946 PTPRTO14522 1441 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 PSAPP07602 524 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 GRIA4P48058 902 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 COL13A1Q5TAT6 717 aaPredicted RBP11.28□□□□□ -0.6
STAMBP-208ENST00000478946 AGMOQ6ZNB7 445 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 LRP10Q7Z4F1 713 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 SLITRK4Q8IW52 837 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
STAMBP-208ENST00000478946 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 PCDHGC4Q9Y5F7 938 aa11.28□□□□□ -0.6
STAMBP-208ENST00000478946 ENPP3O14638 875 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 ENC1O14682 589 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 CLSTN1O94985 981 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 RPS26P62854 115 aaKnown RBP11.27□□□□□ -0.61
STAMBP-208ENST00000478946 GOLM1Q8NBJ4 401 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 TRIM55Q9BYV6 548 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 BHLHE41Q9C0J9 482 aaPredicted RBP11.27□□□□□ -0.61
STAMBP-208ENST00000478946 DZANK1Q9NVP4 752 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
STAMBP-208ENST00000478946 SPATA31D1Q6ZQQ2 1576 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 THBS1P07996 1170 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 ACPPP15309 386 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 TNP2Q05952 138 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 APOBRQ0VD83 1088 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 RPS26P11Q5JNZ5 115 aaPredicted RBP11.26□□□□□ -0.61
STAMBP-208ENST00000478946 SNAP47Q5SQN1 464 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 CPLX3Q8WVH0 158 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 NKD1Q969G9 470 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 PNMA5Q96PV4 448 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 SRPK1Q96SB4 655 aaKnown RBP11.26□□□□□ -0.61
STAMBP-208ENST00000478946 SRRTQ9BXP5 876 aaKnown RBP11.26□□□□□ -0.61
STAMBP-208ENST00000478946 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
STAMBP-208ENST00000478946 SETD1BQ9UPS6 1966 aaKnown RBP11.26□□□□□ -0.61
STAMBP-208ENST00000478946 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
STAMBP-208ENST00000478946 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
STAMBP-208ENST00000478946 TFE3P19532 575 aaPredicted RBP11.25□□□□□ -0.61
STAMBP-208ENST00000478946 NFKB1P19838 968 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 CRKP46108 304 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 PLAURQ03405 335 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 UBAP2LQ14157 1087 aaKnown RBP11.25□□□□□ -0.61
STAMBP-208ENST00000478946 GRIN2CQ14957 1233 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 EFCAB2Q5VUJ9 269 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 HNRNPLLQ8WVV9 542 aaKnown RBP11.25□□□□□ -0.61
STAMBP-208ENST00000478946 SHDQ96IW2 340 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 SEC31BQ9NQW1 1179 aa11.25□□□□□ -0.61
STAMBP-208ENST00000478946 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 NFKBIEO00221 500 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 RASA3Q14644 834 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 SPRED3Q2MJR0 410 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
STAMBP-208ENST00000478946 AFAP1Q8N556 730 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
STAMBP-208ENST00000478946 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 RNPC3Q96LT9 517 aaKnown RBP11.24□□□□□ -0.61
STAMBP-208ENST00000478946 LRRC3Q9BY71 257 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 SNTG2Q9NY99 539 aa11.24□□□□□ -0.61
STAMBP-208ENST00000478946 CDK13Q14004 1512 aaKnown RBP11.24□□□□□ -0.61
STAMBP-208ENST00000478946 A0A096LPE4 126 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 A0A1W2PPZ6 126 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
STAMBP-208ENST00000478946 AVPP01185 164 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.616e-10■□□□□ 10.2
STAMBP-208ENST00000478946 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 TRIM42Q8IWZ5 723 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 NXPE3Q969Y0 559 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 ANAPC16Q96DE5 110 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 DEPDC7Q96QD5 511 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 DNMT3LQ9UJW3 386 aa11.23□□□□□ -0.61
STAMBP-208ENST00000478946 DCDC2BA2VCK2 349 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 MAPTP10636 758 aaKnown RBP11.22□□□□□ -0.61
STAMBP-208ENST00000478946 NRLP54845 237 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 SPEM2Q0P670 501 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 PTPROQ16827 1216 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 IQSEC2Q5JU85 1478 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 ZNF576Q9H609 170 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 MARK1Q9P0L2 795 aa11.22□□□□□ -0.61
STAMBP-208ENST00000478946 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
STAMBP-208ENST00000478946 TRPA1O75762 1119 aa11.21□□□□□ -0.61
STAMBP-208ENST00000478946 BMP1P13497 986 aa11.21□□□□□ -0.61
STAMBP-208ENST00000478946 DHX32Q7L7V1 743 aaKnown RBP11.21□□□□□ -0.61
STAMBP-208ENST00000478946 KCNB2Q92953 911 aa11.21□□□□□ -0.61
STAMBP-208ENST00000478946 BRINP2Q9C0B6 783 aa11.21□□□□□ -0.61
STAMBP-208ENST00000478946 NDFIP2Q9NV92 336 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms