RNA–Protein interactions for RNA: ENST00000478946.1

STAMBP-208, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-208ENST00000478946 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
STAMBP-208ENST00000478946 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
STAMBP-208ENST00000478946 PHF23Q9BUL5 403 aaPredicted RBP25.48■■□□□ 1.67
STAMBP-208ENST00000478946 SENP3Q9H4L4 574 aaPredicted RBP23.9■■□□□ 1.42
STAMBP-208ENST00000478946 PLPPR3Q6T4P5 718 aa23.89■■□□□ 1.41
STAMBP-208ENST00000478946 ADRA2BP18089 450 aa22.32■■□□□ 1.16
STAMBP-208ENST00000478946 PPP6R1Q9UPN7 881 aa22.1■■□□□ 1.13
STAMBP-208ENST00000478946 FOXD1Q16676 465 aa22.04■■□□□ 1.12
STAMBP-208ENST00000478946 KCNA4P22459 653 aa21.95■■□□□ 1.1
STAMBP-208ENST00000478946 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
STAMBP-208ENST00000478946 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
STAMBP-208ENST00000478946 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
STAMBP-208ENST00000478946 CSRNP3Q8WYN3 585 aa21.05■□□□□ 0.96
STAMBP-208ENST00000478946 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
STAMBP-208ENST00000478946 NCBP3Q53F19 620 aaKnown RBP20.94■□□□□ 0.94
STAMBP-208ENST00000478946 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
STAMBP-208ENST00000478946 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
STAMBP-208ENST00000478946 ZBTB22O15209 634 aa20.25■□□□□ 0.83
STAMBP-208ENST00000478946 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
STAMBP-208ENST00000478946 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
STAMBP-208ENST00000478946 FOXD4L1Q9NU39 408 aa19.9■□□□□ 0.78
STAMBP-208ENST00000478946 MSH5O43196 834 aa19.88■□□□□ 0.77
STAMBP-208ENST00000478946 MAPK8IP2Q13387 824 aaPredicted RBP19.74■□□□□ 0.75
STAMBP-208ENST00000478946 RNF216Q9NWF9 866 aaPredicted RBP19.7■□□□□ 0.74
STAMBP-208ENST00000478946 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
STAMBP-208ENST00000478946 DMRT2Q9Y5R5 561 aa19.27■□□□□ 0.68
STAMBP-208ENST00000478946 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
STAMBP-208ENST00000478946 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
STAMBP-208ENST00000478946 RTN4Q9NQC3 1192 aaKnown RBP19.21■□□□□ 0.67
STAMBP-208ENST00000478946 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
STAMBP-208ENST00000478946 ATXN8OSP0DMR3 200 aa19.15■□□□□ 0.66
STAMBP-208ENST00000478946 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
STAMBP-208ENST00000478946 FKBP8Q14318 412 aa18.91■□□□□ 0.62
STAMBP-208ENST00000478946 ATF5Q9Y2D1 282 aaPredicted RBP18.46■□□□□ 0.55
STAMBP-208ENST00000478946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
STAMBP-208ENST00000478946 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
STAMBP-208ENST00000478946 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
STAMBP-208ENST00000478946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.533e-7■□□□□ 10.4
STAMBP-208ENST00000478946 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
STAMBP-208ENST00000478946 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
STAMBP-208ENST00000478946 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
STAMBP-208ENST00000478946 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
STAMBP-208ENST00000478946 APLP2Q06481 763 aa17.9■□□□□ 0.46
STAMBP-208ENST00000478946 SPDYE4A6NLX3 237 aa17.84■□□□□ 0.45
STAMBP-208ENST00000478946 PROM2Q8N271 834 aa17.8■□□□□ 0.44
STAMBP-208ENST00000478946 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
STAMBP-208ENST00000478946 PLCB2Q00722 1185 aa17.71■□□□□ 0.43
STAMBP-208ENST00000478946 VASPP50552 380 aaPredicted RBP17.68■□□□□ 0.42
STAMBP-208ENST00000478946 FBLN2P98095 1184 aa17.58■□□□□ 0.4
STAMBP-208ENST00000478946 IFNLR1Q8IU57 520 aaPredicted RBP17.54■□□□□ 0.4
STAMBP-208ENST00000478946 HAP1P54257 671 aaPredicted RBP17.4■□□□□ 0.38
STAMBP-208ENST00000478946 PKD2Q13563 968 aa17.4■□□□□ 0.38
STAMBP-208ENST00000478946 POLA2Q14181 598 aa17.4■□□□□ 0.38
STAMBP-208ENST00000478946 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
STAMBP-208ENST00000478946 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
STAMBP-208ENST00000478946 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
STAMBP-208ENST00000478946 VSIG10Q8N0Z9 540 aa17.24■□□□□ 0.35
STAMBP-208ENST00000478946 BCANQ96GW7 911 aa17.24■□□□□ 0.35
STAMBP-208ENST00000478946 ZBTB12Q9Y330 459 aaPredicted RBP17.21■□□□□ 0.35
STAMBP-208ENST00000478946 CAPN15O75808 1086 aa17.2■□□□□ 0.34
STAMBP-208ENST00000478946 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
STAMBP-208ENST00000478946 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
STAMBP-208ENST00000478946 SPOCK2Q92563 424 aa17.13■□□□□ 0.33
STAMBP-208ENST00000478946 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
STAMBP-208ENST00000478946 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
STAMBP-208ENST00000478946 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.07■□□□□ 0.32
STAMBP-208ENST00000478946 ECM2O94769 699 aaPredicted RBP17.04■□□□□ 0.32
STAMBP-208ENST00000478946 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
STAMBP-208ENST00000478946 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
STAMBP-208ENST00000478946 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
STAMBP-208ENST00000478946 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
STAMBP-208ENST00000478946 ABCB7O75027 752 aa16.97■□□□□ 0.31
STAMBP-208ENST00000478946 PRKCSHP14314 528 aaPredicted RBP16.96■□□□□ 0.31
STAMBP-208ENST00000478946 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
STAMBP-208ENST00000478946 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
STAMBP-208ENST00000478946 PAXIP1Q6ZW49 1069 aaPredicted RBP16.92■□□□□ 0.3
STAMBP-208ENST00000478946 PLCD3Q8N3E9 789 aa16.87■□□□□ 0.29
STAMBP-208ENST00000478946 SSUH2Q9Y2M2 353 aa16.87■□□□□ 0.29
STAMBP-208ENST00000478946 RGL2O15211 777 aa16.86■□□□□ 0.29
STAMBP-208ENST00000478946 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
STAMBP-208ENST00000478946 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
STAMBP-208ENST00000478946 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
STAMBP-208ENST00000478946 SPDYE2Q495Y8 402 aa16.85■□□□□ 0.29
STAMBP-208ENST00000478946 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
STAMBP-208ENST00000478946 MIER1Q8N108 512 aa16.77■□□□□ 0.28
STAMBP-208ENST00000478946 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
STAMBP-208ENST00000478946 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
STAMBP-208ENST00000478946 DSG3P32926 999 aa16.72■□□□□ 0.27
STAMBP-208ENST00000478946 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
STAMBP-208ENST00000478946 TSHZ2Q9NRE2 1034 aa16.69■□□□□ 0.26
STAMBP-208ENST00000478946 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
STAMBP-208ENST00000478946 CHGAP10645 457 aaKnown RBP16.63■□□□□ 0.25
STAMBP-208ENST00000478946 CIZ1Q9ULV3 898 aaPredicted RBP16.62■□□□□ 0.25
STAMBP-208ENST00000478946 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
STAMBP-208ENST00000478946 PLEKHG5O94827 1062 aa16.59■□□□□ 0.25
STAMBP-208ENST00000478946 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
STAMBP-208ENST00000478946 HS6ST3Q8IZP7 471 aa16.51■□□□□ 0.23
STAMBP-208ENST00000478946 GSE1Q14687 1217 aa16.39■□□□□ 0.21
STAMBP-208ENST00000478946 NBR1Q14596 966 aa16.37■□□□□ 0.21
STAMBP-208ENST00000478946 RNF25Q96BH1 459 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms