RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 JAG2Q9Y219 1238 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 HOXB7P09629 217 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 CWF19L2Q2TBE0 894 aaKnown RBP12.7□□□□□ -0.38
FN1-211ENST00000443816 HACE1Q8IYU2 909 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
FN1-211ENST00000443816 URI1O94763 535 aaPredicted RBP12.7□□□□□ -0.38
FN1-211ENST00000443816 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
FN1-211ENST00000443816 MCM7P33993 719 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 PDCL2Q8N4E4 241 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 FAM89AQ96GI7 184 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 HAUS2Q9NVX0 235 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 UBASH3AP57075 661 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 SNX16P57768 344 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 LMBR1Q8WVP7 490 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 AS3MTQ9HBK9 375 aa12.7□□□□□ -0.38
FN1-211ENST00000443816 NMIQ13287 307 aaPredicted RBP12.69□□□□□ -0.38
FN1-211ENST00000443816 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 SMCR8Q8TEV9 937 aaPredicted RBP12.69□□□□□ -0.38
FN1-211ENST00000443816 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
FN1-211ENST00000443816 EFCAB6Q5THR3 1501 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 IRX3P78415 501 aaPredicted RBP12.69□□□□□ -0.38
FN1-211ENST00000443816 UBE4AQ14139 1066 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 MAK16Q9BXY0 300 aaKnown RBP12.69□□□□□ -0.38
FN1-211ENST00000443816 TRPC5Q9UL62 973 aaPredicted RBP12.69□□□□□ -0.38
FN1-211ENST00000443816 PLCD4Q9BRC7 762 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 LRRC2Q9BYS8 371 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 LZTS2Q9BRK4 669 aa12.69□□□□□ -0.38
FN1-211ENST00000443816 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
FN1-211ENST00000443816 SP4Q02446 784 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 PREX2Q70Z35 1606 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 ZNF165P49910 485 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 STRN3Q13033 797 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
FN1-211ENST00000443816 GOLGA1Q92805 767 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 KDM5DQ9BY66 1539 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 AKR1B10O60218 316 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 CKAP4Q07065 602 aaKnown RBP12.68□□□□□ -0.38
FN1-211ENST00000443816 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 KIFAP3Q92845 792 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 FNBP1Q96RU3 617 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 PPP1R2P41236 205 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 ORAI2Q96SN7 254 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 HAUS3Q68CZ6 603 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 DHX32Q7L7V1 743 aaKnown RBP12.68□□□□□ -0.38
FN1-211ENST00000443816 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 IBTKQ9P2D0 1353 aaPredicted RBP12.68□□□□□ -0.38
FN1-211ENST00000443816 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
FN1-211ENST00000443816 A0A1B0GUL7 405 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 PTPDC1A2A3K4 754 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 DNM2P50570 870 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 RAD50Q92878 1312 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 UQCRHLA0A096LP55 91 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 ATP2A1O14983 1001 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 MBD4O95243 580 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 UQCRHP07919 91 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
FN1-211ENST00000443816 LPIN2Q92539 896 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 EPB41P11171 864 aaKnown RBP12.67□□□□□ -0.38
FN1-211ENST00000443816 DCAF15Q66K64 600 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 NEK11Q8NG66 645 aa12.67□□□□□ -0.38
FN1-211ENST00000443816 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 DCPSQ96C86 337 aaKnown RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 TMEM87BQ96K49 555 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 NECAB1Q8N987 351 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 AZI2Q9H6S1 392 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 SPHKAPQ2M3C7 1700 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 GSTA5Q7RTV2 222 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 RXRBP28702 533 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 KMT5BQ4FZB7 885 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 MRPS27Q92552 414 aaKnown RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 QTRT2Q9H974 415 aaKnown RBP12.66□□□□□ -0.38
FN1-211ENST00000443816 AATFQ9NY61 560 aaKnown RBP eCLIP12.66□□□□□ -0.382e-10■■■■■ 89.9
FN1-211ENST00000443816 KCNG1Q9UIX4 513 aa12.66□□□□□ -0.38
FN1-211ENST00000443816 ATL3Q6DD88 541 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 TMX3Q96JJ7 454 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 EYA2O00167 538 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
FN1-211ENST00000443816 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 KDM6BO15054 1643 aa12.65□□□□□ -0.38
FN1-211ENST00000443816 STX10O60499 249 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms