RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 RALYLQ86SE5 291 aaKnown RBP19.94■□□□□ 0.78
CTSD-204ENST00000433655 BICD2Q8TD16 824 aa19.94■□□□□ 0.78
CTSD-204ENST00000433655 NAP1L5Q96NT1 182 aaPredicted RBP19.94■□□□□ 0.78
CTSD-204ENST00000433655 STRBPQ96SI9 672 aaKnown RBP19.94■□□□□ 0.78
CTSD-204ENST00000433655 NIP7Q9Y221 180 aaKnown RBP eCLIP19.94■□□□□ 0.784e-13■□□□□ 10.1
CTSD-204ENST00000433655 KCNQ2O43526 872 aa19.93■□□□□ 0.78
CTSD-204ENST00000433655 CEBPZQ03701 1054 aaKnown RBP19.93■□□□□ 0.78
CTSD-204ENST00000433655 CKAP2LQ8IYA6 745 aa19.93■□□□□ 0.78
CTSD-204ENST00000433655 CHMP4CQ96CF2 233 aa19.93■□□□□ 0.78
CTSD-204ENST00000433655 MPHOSPH8Q99549 860 aa19.93■□□□□ 0.78
CTSD-204ENST00000433655 NUTM2BA6NNL0 878 aaPredicted RBP19.93■□□□□ 0.78
CTSD-204ENST00000433655 NUTM2EB1AL46 878 aaPredicted RBP19.93■□□□□ 0.78
CTSD-204ENST00000433655 RAB11FIP4Q86YS3 637 aa19.93■□□□□ 0.78
CTSD-204ENST00000433655 NUTM2AQ8IVF1 878 aaPredicted RBP19.93■□□□□ 0.78
CTSD-204ENST00000433655 OFD1O75665 1012 aa19.92■□□□□ 0.78
CTSD-204ENST00000433655 CCDC152Q4G0S7 254 aa19.92■□□□□ 0.78
CTSD-204ENST00000433655 EPB41L4AQ9HCS5 686 aaPredicted RBP19.92■□□□□ 0.78
CTSD-204ENST00000433655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.92■□□□□ 0.783e-10■□□□□ 9.8
CTSD-204ENST00000433655 TAF1P21675 1872 aa19.92■□□□□ 0.78
CTSD-204ENST00000433655 ZMYM6O95789 1325 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 NEDD4P46934 1319 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 SCN7AQ01118 1682 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 ALX1Q15699 326 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 ATL3Q6DD88 541 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 OTUD7BQ6GQQ9 843 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 MAGEB6Q8N7X4 407 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 FAM200AQ8TCP9 573 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 GOLPH3LQ9H4A5 285 aa19.91■□□□□ 0.78
CTSD-204ENST00000433655 SH2B2O14492 632 aaPredicted RBP19.9■□□□□ 0.78
CTSD-204ENST00000433655 PTMAP06454 111 aaKnown RBP19.9■□□□□ 0.78
CTSD-204ENST00000433655 TACC3Q9Y6A5 838 aa19.9■□□□□ 0.78
CTSD-204ENST00000433655 APPP05067 770 aa19.9■□□□□ 0.78
CTSD-204ENST00000433655 BCAMP50895 628 aa19.9■□□□□ 0.78
CTSD-204ENST00000433655 AIDAQ96BJ3 306 aa19.9■□□□□ 0.78
CTSD-204ENST00000433655 ZNF396Q96N95 335 aaPredicted RBP19.9■□□□□ 0.78
CTSD-204ENST00000433655 SENP2Q9HC62 589 aa19.9■□□□□ 0.78
CTSD-204ENST00000433655 ANGEL1Q9UNK9 670 aaKnown RBP19.9■□□□□ 0.78
CTSD-204ENST00000433655 B4E1Z4 1266 aa19.89■□□□□ 0.77
CTSD-204ENST00000433655 MBD4O95243 580 aa19.89■□□□□ 0.77
CTSD-204ENST00000433655 IGHMBP2P38935 993 aaKnown RBP19.89■□□□□ 0.77
CTSD-204ENST00000433655 CHRNDQ07001 517 aa19.89■□□□□ 0.77
CTSD-204ENST00000433655 LINC00116Q8NCU8 138 aa19.89■□□□□ 0.77
CTSD-204ENST00000433655 ORC3Q9UBD5 711 aaPredicted RBP19.89■□□□□ 0.77
CTSD-204ENST00000433655 DHX16O60231 1041 aaKnown RBP19.88■□□□□ 0.77
CTSD-204ENST00000433655 MAP3K12Q12852 859 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 TRDNQ13061 729 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 ANO6Q4KMQ2 910 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 MPNDQ8N594 471 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 FBXO18Q8NFZ0 1043 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 SMARCC1Q92922 1105 aaPredicted RBP19.88■□□□□ 0.77
CTSD-204ENST00000433655 INCENPQ9NQS7 918 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 GJB4Q9NTQ9 266 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 PATL2C9JE40 543 aaKnown RBP19.88■□□□□ 0.77
CTSD-204ENST00000433655 SNW1Q13573 536 aaKnown RBP19.88■□□□□ 0.77
CTSD-204ENST00000433655 C3orf67Q6ZVT6 689 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 CCAR1Q8IX12 1150 aaKnown RBP19.88■□□□□ 0.77
CTSD-204ENST00000433655 IFNL3Q8IZI9 196 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 C8orf76Q96K31 380 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 ARMT1Q9H993 441 aa19.88■□□□□ 0.77
CTSD-204ENST00000433655 LUZP1Q86V48 1076 aa19.87■□□□□ 0.77
CTSD-204ENST00000433655 ENGASEQ8NFI3 743 aa19.87■□□□□ 0.77
CTSD-204ENST00000433655 CBX8Q9HC52 389 aa19.87■□□□□ 0.77
CTSD-204ENST00000433655 GSG1L2A8MUP6 293 aa19.86■□□□□ 0.77
CTSD-204ENST00000433655 IGDCC4Q8TDY8 1250 aa19.86■□□□□ 0.77
CTSD-204ENST00000433655 RTEL1Q9NZ71 1219 aa19.86■□□□□ 0.77
CTSD-204ENST00000433655 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
CTSD-204ENST00000433655 KIF28PB7ZC32 967 aa19.86■□□□□ 0.77
CTSD-204ENST00000433655 APOA5Q6Q788 366 aa19.86■□□□□ 0.77
CTSD-204ENST00000433655 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.86■□□□□ 0.77
CTSD-204ENST00000433655 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 CLEC4GQ6UXB4 293 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 LCORLQ8N3X6 602 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 TMEM87BQ96K49 555 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 ZNF830Q96NB3 372 aaPredicted RBP19.85■□□□□ 0.77
CTSD-204ENST00000433655 LY9Q9HBG7 655 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 ZNF652Q9Y2D9 606 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 ZNF804BA4D1E1 1349 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 PNPLA7Q6ZV29 1317 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 CPLX1O14810 134 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 PRKAB2O43741 272 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 RXRAP19793 462 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 CDC27P30260 824 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 CTDSPL2Q05D32 466 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 PCDHA7Q9UN72 937 aa19.85■□□□□ 0.77
CTSD-204ENST00000433655 CACNA1SQ13698 1873 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 WTIPA6NIX2 430 aaPredicted RBP19.84■□□□□ 0.77
CTSD-204ENST00000433655 METAP2P50579 478 aaKnown RBP eCLIP19.84■□□□□ 0.775e-7■■□□□ 12.4
CTSD-204ENST00000433655 KCNQ4P56696 695 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 KIF23Q02241 960 aaPredicted RBP19.84■□□□□ 0.77
CTSD-204ENST00000433655 FAM98CQ17RN3 349 aaKnown RBP19.84■□□□□ 0.77
CTSD-204ENST00000433655 LINC00301Q8NCQ3 95 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 AIFM3Q96NN9 605 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 NAPBQ9H115 298 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 CLIC4Q9Y696 253 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 COL24A1Q17RW2 1714 aa19.84■□□□□ 0.77
CTSD-204ENST00000433655 PLCB2Q00722 1185 aa19.83■□□□□ 0.77
CTSD-204ENST00000433655 SGMS1Q86VZ5 419 aa19.83■□□□□ 0.77
CTSD-204ENST00000433655 TTC12Q9H892 705 aaPredicted RBP19.83■□□□□ 0.77
CTSD-204ENST00000433655 FAM217BQ9NTX9 383 aaPredicted RBP19.83■□□□□ 0.77
CTSD-204ENST00000433655 POLR3DP05423 398 aaPredicted RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms