RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
LINC00343-201ENST00000414368 FANCIQ9NVI1 1328 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 CICQ96RK0 1608 aaPredicted RBP8.84□□□□□ -0.99
LINC00343-201ENST00000414368 ATP9BO43861 1147 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 CANXP27824 592 aaKnown RBP8.84□□□□□ -0.99
LINC00343-201ENST00000414368 LCE3BQ5TA77 95 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
LINC00343-201ENST00000414368 TSPYL6Q8N831 410 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 C1QTNF2Q9BXJ5 285 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 TEX13AQ9BXU3 409 aaPredicted RBP8.84□□□□□ -0.99
LINC00343-201ENST00000414368 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 ZBTB1Q9Y2K1 713 aa8.84□□□□□ -0.99
LINC00343-201ENST00000414368 PNPLA7Q6ZV29 1317 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 PIK3CDO00329 1044 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 RPS6KA4O75676 772 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 EXOSC9Q06265 439 aaKnown RBP8.83□□□□□ -1
LINC00343-201ENST00000414368 SLFN5Q08AF3 891 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 DUSP27Q5VZP5 1158 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 NBPF10Q6P3W6 841 aaKnown RBP8.83□□□□□ -1
LINC00343-201ENST00000414368 NBPF15Q8N660 670 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
LINC00343-201ENST00000414368 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
LINC00343-201ENST00000414368 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 QSER1Q2KHR3 1735 aa8.83□□□□□ -1
LINC00343-201ENST00000414368 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
LINC00343-201ENST00000414368 MAN1A2O60476 641 aa8.82□□□□□ -1
LINC00343-201ENST00000414368 ANXA1P04083 346 aa8.82□□□□□ -1
LINC00343-201ENST00000414368 ARID5BQ14865 1188 aa8.82□□□□□ -1
LINC00343-201ENST00000414368 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
LINC00343-201ENST00000414368 RNF20Q5VTR2 975 aa8.82□□□□□ -1
LINC00343-201ENST00000414368 TRMT44Q8IYL2 757 aaKnown RBP8.82□□□□□ -1
LINC00343-201ENST00000414368 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
LINC00343-201ENST00000414368 MAFBQ9Y5Q3 323 aaPredicted RBP8.82□□□□□ -1
LINC00343-201ENST00000414368 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
LINC00343-201ENST00000414368 CASZ1Q86V15 1759 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 E9PSI1 815 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 ZBTB7AO95365 584 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 MYL6BP14649 208 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 HMGB2P26583 209 aaKnown RBP8.81□□□□□ -1
LINC00343-201ENST00000414368 EIF5P55010 431 aaKnown RBP8.81□□□□□ -1
LINC00343-201ENST00000414368 PROSER3Q2NL68 480 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 VASH1Q7L8A9 365 aaPredicted RBP8.81□□□□□ -1
LINC00343-201ENST00000414368 PBXIP1Q96AQ6 731 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 MYH16Q9H6N6 1097 aa8.81□□□□□ -1
LINC00343-201ENST00000414368 SRP68Q9UHB9 627 aaKnown RBP8.81□□□□□ -1
LINC00343-201ENST00000414368 C4AP0C0L4 1744 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 USP17L5A8MUK1 530 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 SSFA2P28290 1259 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 RFC4P35249 363 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 RAB15P59190 212 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 TWISTNBQ3B726 338 aaPredicted RBP8.8□□□□□ -1
LINC00343-201ENST00000414368 MSL1Q68DK7 614 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 TRMT2AQ8IZ69 625 aaKnown RBP8.8□□□□□ -1
LINC00343-201ENST00000414368 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
LINC00343-201ENST00000414368 PLPP7Q8NBV4 271 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 SPOCK3Q9BQ16 436 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 CHPF2Q9P2E5 772 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
LINC00343-201ENST00000414368 COL15A1P39059 1388 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.79□□□□□ -1
LINC00343-201ENST00000414368 USP17L3A6NCW0 530 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 USP17L4A6NCW7 530 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 VAMP4O75379 141 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 ARHGEF15O94989 841 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 IL6STP40189 918 aaPredicted RBP8.79□□□□□ -1
LINC00343-201ENST00000414368 USP17L2Q6R6M4 530 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 USP17L1Q7RTZ2 530 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 FLAD1Q8NFF5 587 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 KCTD15Q96SI1 283 aaPredicted RBP8.79□□□□□ -1
LINC00343-201ENST00000414368 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
LINC00343-201ENST00000414368 HOXB7P09629 217 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 AIMP1Q12904 312 aaKnown RBP8.78□□□□□ -1
LINC00343-201ENST00000414368 MAP7D1Q3KQU3 841 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 USPL1Q5W0Q7 1092 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 LRP10Q7Z4F1 713 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 DDX21Q9NR30 783 aaKnown RBP eCLIP8.78□□□□□ -1
LINC00343-201ENST00000414368 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
LINC00343-201ENST00000414368 A0A087WZG4 1122 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1.01
LINC00343-201ENST00000414368 GYS1P13807 737 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 EML3Q32P44 896 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 CCDC30Q5VVM6 783 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 COPS6Q7L5N1 327 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
LINC00343-201ENST00000414368 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 PHTF2Q8N3S3 785 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 COL25A1Q9BXS0 654 aaPredicted RBP8.77□□□□□ -1.01
LINC00343-201ENST00000414368 PHAXQ9H814 394 aaKnown RBP8.77□□□□□ -1.01
LINC00343-201ENST00000414368 VRTNQ9H8Y1 702 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
LINC00343-201ENST00000414368 NARFQ9UHQ1 456 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 NUP98P52948 1817 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 CACNA1FO60840 1977 aa8.77□□□□□ -1.01
LINC00343-201ENST00000414368 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms