RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FRMD6Q96NE9 622 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 APBA2Q99767 749 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 HEG1Q9ULI3 1381 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
SNHG3-201ENST00000413987 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-201ENST00000413987 NEXNQ0ZGT2 675 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 SYCP2LQ5T4T6 812 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 CCDC30Q5VVM6 783 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 CC2D1AQ6P1N0 951 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-201ENST00000413987 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 MUC3BQ9H195 1237 aa11.08□□□□□ -0.64
SNHG3-201ENST00000413987 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
SNHG3-201ENST00000413987 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 K7ELQ4 463 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 FKBP5Q13451 457 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 CEP89Q96ST8 783 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 ZKSCAN5Q9Y2L8 839 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 ATRNO75882 1429 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 KCNQ4P56696 695 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 VAC14Q08AM6 782 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 AIMP1Q12904 312 aaKnown RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 WDR75Q8IWA0 830 aaKnown RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 FMNL2Q96PY5 1086 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 CCDC94Q9BW85 323 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-201ENST00000413987 DDX19BQ9UMR2 479 aa11.07□□□□□ -0.64
SNHG3-201ENST00000413987 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
SNHG3-201ENST00000413987 DMTNQ08495 405 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 CCDC39Q9UFE4 941 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 SYNPO2Q9UMS6 1093 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 BCL9O00512 1426 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 PAPPAQ13219 1627 aa11.06□□□□□ -0.64
SNHG3-201ENST00000413987 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 NUCB2P80303 420 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 MTA1Q13330 715 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 SAMD3Q8N6K7 520 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 MYCBPQ99417 103 aaPredicted RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 THSD7AQ9UPZ6 1657 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 ABCC4O15439 1325 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 PPP1R12AO14974 1030 aaPredicted RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 BAG4O95429 457 aaKnown RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 SNRPA1P09661 255 aaKnown RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 EAPPQ56P03 285 aaPredicted RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 FERMT3Q86UX7 667 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.05□□□□□ -0.64
SNHG3-201ENST00000413987 LZTS1Q9Y250 596 aa11.05□□□□□ -0.64
SNHG3-201ENST00000413987 UBR2Q8IWV8 1755 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 NPHP1O15259 732 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 A1BGP04217 495 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 RAVER1Q8IY67 606 aaKnown RBP11.04□□□□□ -0.64
SNHG3-201ENST00000413987 RELTQ969Z4 430 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 MRFAP1L1Q96HT8 127 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 ASB16Q96NS5 453 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
SNHG3-201ENST00000413987 CHST12Q9NRB3 414 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 TNFRSF10BO14763 440 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 PSEN1P49768 467 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 FBXO41Q8TF61 875 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 RSPH1Q8WYR4 309 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 PRKAB1Q9Y478 270 aa11.04□□□□□ -0.64
SNHG3-201ENST00000413987 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 HIP1RO75146 1068 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 SCNN1AP37088 669 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
SNHG3-201ENST00000413987 BRD3Q15059 726 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 BMP2KLQ5H9B9 411 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
SNHG3-201ENST00000413987 RPAINQ86UA6 219 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 CWC25Q9NXE8 425 aaPredicted RBP11.03□□□□□ -0.64
SNHG3-201ENST00000413987 PI4KAP2A4QPH2 592 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 GRXCR2A6NFK2 248 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 HOXB7P09629 217 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 FANCCQ00597 558 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 RAPGEF1Q13905 1077 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 ZSCAN23Q3MJ62 389 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 PI4KAP1Q8N8J0 262 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 ARHGAP45Q92619 1136 aa11.03□□□□□ -0.64
SNHG3-201ENST00000413987 API5Q9BZZ5 524 aaKnown RBP11.03□□□□□ -0.64
SNHG3-201ENST00000413987 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
SNHG3-201ENST00000413987 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
SNHG3-201ENST00000413987 KIF20AO95235 890 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 MAPK1P28482 360 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 NUCB1Q02818 461 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 ARID5AQ03989 594 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 MPNDQ8N594 471 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 ABCF2Q9UG63 623 aa11.02□□□□□ -0.65
SNHG3-201ENST00000413987 RGS17Q9UGC6 210 aaPredicted RBP11.02□□□□□ -0.65
SNHG3-201ENST00000413987 NOVA2Q9UNW9 492 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms