RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 GUCY1B3Q02153 619 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 RABEP1Q15276 862 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 ZMYM1Q5SVZ6 1142 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 STOX1Q6ZVD7 989 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 ZNF804AQ7Z570 1209 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 CMTR1Q8N1G2 835 aaKnown RBP11.58□□□□□ -0.56
SMPD4-203ENST00000412570 MASTLQ96GX5 879 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 CYP46A1Q9Y6A2 500 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 AOX1Q06278 1338 aa11.58□□□□□ -0.56
SMPD4-203ENST00000412570 HIP1O00291 1037 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 LDHBP07195 334 aaKnown RBP11.57□□□□□ -0.56
SMPD4-203ENST00000412570 NPR1P16066 1061 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 NCLP19338 710 aaKnown RBP11.57□□□□□ -0.56
SMPD4-203ENST00000412570 HSPA4P34932 840 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 ADD2P35612 726 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 USP5P45974 858 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 APOBRQ0VD83 1088 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 FERMT3Q86UX7 667 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 APPBP2Q92624 585 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 TMX3Q96JJ7 454 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 MAGEB6P1A0A0J9YX57 407 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 ZNF213O14771 459 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 RANBP6O60518 1105 aaKnown RBP11.57□□□□□ -0.56
SMPD4-203ENST00000412570 TGFBRAP1Q8WUH2 860 aa11.57□□□□□ -0.56
SMPD4-203ENST00000412570 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
SMPD4-203ENST00000412570 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-203ENST00000412570 LARGE2Q8N3Y3 721 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 GJA3Q9Y6H8 435 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 ATP2B2Q01814 1243 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 Q6ZUG5 572 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 VPS37CA5D8V6 355 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-203ENST00000412570 EIF6P56537 245 aaKnown RBP11.56□□□□□ -0.56
SMPD4-203ENST00000412570 FAM47AQ5JRC9 791 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 MCM9Q9NXL9 1143 aa11.56□□□□□ -0.56
SMPD4-203ENST00000412570 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
SMPD4-203ENST00000412570 BBOX1O75936 387 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 USP17L8P0C7I0 530 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 TTF1Q15361 905 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-203ENST00000412570 SLC44A5Q8NCS7 719 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 MAP4K1Q92918 833 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 DYNLL2Q96FJ2 89 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 NEK1Q96PY6 1258 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 GDPD2Q9HCC8 539 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 ALDH1B1P30837 517 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 NUP133Q8WUM0 1156 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 IMMTQ16891 758 aaKnown RBP11.55□□□□□ -0.56
SMPD4-203ENST00000412570 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
SMPD4-203ENST00000412570 CLRN2A0PK11 232 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 USP17L21D6R901 530 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 ARID4AP29374 1257 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-203ENST00000412570 RASSF7Q02833 373 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 SENP2Q9HC62 589 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 ATP6V0A2Q9Y487 856 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 E7EWF7 191 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 MICU3Q86XE3 530 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 TTLL6Q8N841 843 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 SH3RF3Q8TEJ3 882 aaPredicted RBP11.54□□□□□ -0.56
SMPD4-203ENST00000412570 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
SMPD4-203ENST00000412570 SHTN1A0MZ66 631 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 NMT2O60551 498 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 TRDNQ13061 729 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 IFNL3Q8IZI9 196 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 COL5A3P25940 1745 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 CEBPZQ03701 1054 aaKnown RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 FBXO33Q7Z6M2 555 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 TPCN1Q9ULQ1 816 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 TNRC6CQ9HCJ0 1690 aaKnown RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 LRRFIP1Q32MZ4 808 aaKnown RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 ARHGAP27Q6ZUM4 889 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 CLEC10AQ8IUN9 316 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
SMPD4-203ENST00000412570 COL1A1P02452 1464 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-203ENST00000412570 JAK2O60674 1132 aa11.52□□□□□ -0.56
SMPD4-203ENST00000412570 POLR3DP05423 398 aaPredicted RBP11.52□□□□□ -0.56
SMPD4-203ENST00000412570 ATP2B4P23634 1241 aa11.52□□□□□ -0.56
SMPD4-203ENST00000412570 OTUD7BQ6GQQ9 843 aa11.52□□□□□ -0.56
SMPD4-203ENST00000412570 VEZTQ9HBM0 779 aa11.52□□□□□ -0.56
SMPD4-203ENST00000412570 HELLSQ9NRZ9 838 aa11.52□□□□□ -0.56
SMPD4-203ENST00000412570 U3KPZ7 1027 aaPredicted RBP11.52□□□□□ -0.56
SMPD4-203ENST00000412570 ECE2O60344 883 aa11.52□□□□□ -0.57
SMPD4-203ENST00000412570 BTDP43251 543 aa11.52□□□□□ -0.57
SMPD4-203ENST00000412570 ME3Q16798 604 aa11.52□□□□□ -0.57
SMPD4-203ENST00000412570 MCTP1Q6DN14 999 aa11.52□□□□□ -0.57
SMPD4-203ENST00000412570 TAF1LQ8IZX4 1826 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms