RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
RAPGEF3-204ENST00000405493 ASAP1Q9ULH1 1129 aa13.44□□□□□ -0.26
RAPGEF3-204ENST00000405493 ZKSCAN5Q9Y2L8 839 aa13.44□□□□□ -0.26
RAPGEF3-204ENST00000405493 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 KIF18AQ8NI77 898 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 XAGE2Q96GT9 111 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 TBCAO75347 108 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 SUPT20HL1Q3ZLR7 823 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 RBM28Q9NW13 759 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 TNNT1P13805 278 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 TMCO3Q6UWJ1 677 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 UBA5Q9GZZ9 404 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 CENPHQ9H3R5 247 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 GOPCQ9HD26 462 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 KLF18A0A0U1RQI7 1052 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 GTF2IP78347 998 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 PARP1P09874 1014 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 CETN2P41208 172 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 TTF2Q9UNY4 1162 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-204ENST00000405493 KIF4AO95239 1232 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 TNNI3KQ59H18 835 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 FPGT-TNNI3KV9GXZ4 949 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 MBD4O95243 580 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 HEATR3Q7Z4Q2 680 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 TNNQ9UQP3 1299 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 CTAGE5O15320 804 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 NEFHP12036 1026 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 CCDC24Q8N4L8 307 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 TAF4BQ92750 862 aa13.42□□□□□ -0.26
RAPGEF3-204ENST00000405493 TOP1P11387 765 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 RBM25P49756 843 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 CALCOCO1Q9P1Z2 691 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 DKC1O60832 514 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 ARMC9Q7Z3E5 817 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 USP19O94966 1318 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 BIN1O00499 593 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 SEMA3EO15041 775 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 SEC24BO95487 1268 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 C16orf45Q96MC5 204 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 TSPYL1Q9H0U9 437 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 SSR1P43307 286 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 NECAB1Q8N987 351 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 MASTLQ96GX5 879 aa13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-204ENST00000405493 MAP3K9P80192 1104 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 SPA17Q15506 151 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 CCDC125Q86Z20 511 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 GRIN3BO60391 1043 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 MMP10P09238 476 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 SPATA5Q8NB90 893 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 USP40Q9NVE5 1235 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 CCDC171Q6TFL3 1326 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 CASQ1P31415 396 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 KDRP35968 1356 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 ANAPC15P60006 121 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 APPBP2Q92624 585 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 NEMFO60524 1076 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 SYCP3Q8IZU3 236 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 ZBTB1Q9Y2K1 713 aa13.4□□□□□ -0.26
RAPGEF3-204ENST00000405493 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.27
RAPGEF3-204ENST00000405493 NOLC1Q14978 699 aaKnown RBP eCLIP13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 SEPT7Q16181 437 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 VPS36Q86VN1 386 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 CRB1P82279 1406 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 ZSCAN12O43309 604 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 RBM8AQ9Y5S9 174 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 TAF5LO75529 589 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 LIG1P18858 919 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 STX1AQ16623 288 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 CPLX3Q8WVH0 158 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 BICD1Q96G01 975 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 PRC1O43663 620 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 NUP88Q99567 741 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF3-204ENST00000405493 SAP30BPQ9UHR5 308 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms