RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 NAPAP54920 295 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 CCDC40Q4G0X9 1142 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 NYXQ9GZU5 481 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 DDX21Q9NR30 783 aaKnown RBP eCLIP3.71□□□□□ -1.82
KNL1-202ENST00000399668 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.71□□□□□ -1.82
KNL1-202ENST00000399668 V9GYY5 206 aaPredicted RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 TTC41PQ6P2S7 1318 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 CCDC171Q6TFL3 1326 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 RTL1A6NKG5 1358 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 ABCA6Q8N139 1617 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 CKAP5Q14008 2032 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 VWA3AA6NCI4 1184 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 TAF5LO75529 589 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 STX17P56962 302 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 PPP4R3AQ6IN85 833 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 EDC3Q96F86 508 aaKnown RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 TRERF1Q96PN7 1200 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 SMCHD1A6NHR9 2005 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 KIAA1210Q9ULL0 1709 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 YEATS4O95619 227 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 LDHCP07864 332 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 SKILP12757 684 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 DESP17661 470 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 SYT1P21579 422 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 KRT2P35908 639 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 ZRSR2Q15696 482 aaKnown RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 DCAF5Q96JK2 942 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 AATFQ9NY61 560 aaKnown RBP eCLIP3.71□□□□□ -1.82
KNL1-202ENST00000399668 IFNKQ9P0W0 207 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 TRIP12Q14669 1992 aaPredicted RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 RNF17Q9BXT8 1623 aaKnown RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 PRDM15P57071 1507 aaPredicted RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 BLMP54132 1417 aaPredicted RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 SLC27A2O14975 620 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 CCNT1O60563 726 aaKnown RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 ITGA6P23229 1130 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 MAP2K1Q02750 393 aaPredicted RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 FAM173BQ6P4H8 233 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 PAXIP1Q6ZW49 1069 aaPredicted RBP3.71□□□□□ -1.82
KNL1-202ENST00000399668 CCDC186Q7Z3E2 898 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 CABP5Q9NP86 173 aa3.71□□□□□ -1.82
KNL1-202ENST00000399668 ZFYVE16Q7Z3T8 1539 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 KIDINS220Q9ULH0 1771 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 IQGAP1P46940 1657 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 CTAGE9A4FU28 777 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 GPAA1O43292 621 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 LDHBP07195 334 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 TERF1P54274 439 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 CETN1Q12798 172 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 TPTE2Q6XPS3 522 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 METTL22Q9BUU2 404 aaPredicted RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 ERCC6L2Q5T890 1561 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 hCG_1642624A0A1W2PR95 340 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ALDH1L1O75891 902 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 RPS6KB1P23443 525 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 CTNNA2P26232 953 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 NOLC1Q14978 699 aaKnown RBP eCLIP3.7□□□□□ -1.82
KNL1-202ENST00000399668 RBM26Q5T8P6 1007 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 CTR9Q6PD62 1173 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 BICD1Q96G01 975 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 SPDYE3A6NKU9 549 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 GNPATO15228 680 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 TOM1O60784 492 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 EIF6P56537 245 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 GSTO1P78417 241 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 FAM212AQ96EL1 285 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 VEZTQ9HBM0 779 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 TFCP2L1Q9NZI6 479 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 DNAI1Q9UI46 699 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ZBTB21Q9ULJ3 1066 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 PAXBP1Q9Y5B6 917 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 PREX1Q8TCU6 1659 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 LMTK3Q96Q04 1460 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 PTPDC1A2A3K4 754 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 NEBLO76041 1014 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ERCC3P19447 782 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 CETN2P41208 172 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 AKNAD1Q5T1N1 836 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ARFGAP3Q9NP61 516 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 TRPM6Q9BX84 2022 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 USP19O94966 1318 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 TRIM75PA6NK02 468 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 DYNC1I1O14576 645 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ZNF804AQ7Z570 1209 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 MRPS27Q92552 414 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 EHMT1Q9H9B1 1298 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 CGNQ9P2M7 1197 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 SBNO1A3KN83 1393 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 PCDH11XQ9BZA7 1347 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 PCDH11YQ9BZA8 1340 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 MCM3P25205 808 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 CALML3P27482 149 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ASIC1P78348 528 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 UBXN1Q04323 297 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 TCP10Q12799 353 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 KARSQ15046 597 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 FAM98CQ17RN3 349 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 INTS4Q96HW7 963 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 SLC52A2Q9HAB3 445 aa3.7□□□□□ -1.82
KNL1-202ENST00000399668 ZHX1Q9UKY1 873 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms