RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 BAZ2AQ9UIF9 1905 aaKnown RBP16.85■□□□□ 0.29
CDC42SE2-202ENST00000395246 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE2-202ENST00000395246 SBK1Q52WX2 424 aa16.85■□□□□ 0.29
CDC42SE2-202ENST00000395246 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
CDC42SE2-202ENST00000395246 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
CDC42SE2-202ENST00000395246 LIFRP42702 1097 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 PPP4CP60510 307 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 ZNF445P59923 1031 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 FKBP1AP62942 108 aaKnown RBP16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 ZNF827Q17R98 1081 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 GNL3LQ9NVN8 582 aaKnown RBP16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 SUGT1Q9Y2Z0 365 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 BCAMP50895 628 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 SLC9C2Q5TAH2 1124 aa16.84■□□□□ 0.29
CDC42SE2-202ENST00000395246 CTDNEP1O95476 244 aa16.83■□□□□ 0.29
CDC42SE2-202ENST00000395246 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.29
CDC42SE2-202ENST00000395246 SYT1P21579 422 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 NOVP48745 357 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 ATL3Q6DD88 541 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 NAA16Q6N069 864 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 CNBD1Q8NA66 436 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 TMEM87BQ96K49 555 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 CAMKK2Q96RR4 588 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 MYH1P12882 1939 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 SP8Q8IXZ3 490 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 TACC3Q9Y6A5 838 aa16.83■□□□□ 0.28
CDC42SE2-202ENST00000395246 TRAK2O60296 914 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 NLGN1Q8N2Q7 840 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 STX6O43752 255 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 PDCP20941 246 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 SLFNL1Q499Z3 407 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 SERPINB2P05120 415 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 IFNL3Q8IZI9 196 aa16.82■□□□□ 0.28
CDC42SE2-202ENST00000395246 F13A1P00488 732 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 Q6ZUG5 572 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 CNNM2Q9H8M5 875 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 FER1L6Q2WGJ9 1857 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 PDIA3P30101 505 aaKnown RBP16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 KCNQ4P56696 695 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 CAVIN4Q5BKX8 364 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 NSUN7Q8NE18 718 aaKnown RBP16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 GAKO14976 1311 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 SLX4Q8IY92 1834 aa16.81■□□□□ 0.28
CDC42SE2-202ENST00000395246 SH2B2O14492 632 aaPredicted RBP16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 ST5P78524 1137 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 SCRN1Q12765 414 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 ADGRA1Q86SQ6 560 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 NCOA7Q8NI08 942 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 MRIQ9BWK5 157 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 EP400Q96L91 3159 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 ANKS1AQ92625 1134 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 CPA1P15085 419 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 MCM5P33992 734 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 TBC1D10CQ8IV04 446 aa16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 CCDC85AQ96PX6 553 aaPredicted RBP16.8■□□□□ 0.28
CDC42SE2-202ENST00000395246 MYH6P13533 1939 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 HMGN5P82970 282 aaKnown RBP16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 ARFGEF1Q9Y6D6 1849 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 ORC4O43929 436 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 RXRBP28702 533 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 GJB2P29033 226 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 PLIN4Q96Q06 1357 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 TRIM37O94972 964 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 FAM182BQ5T319 152 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 ADAMTSL1Q8N6G6 1762 aa16.79■□□□□ 0.28
CDC42SE2-202ENST00000395246 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 STYK1Q6J9G0 422 aa16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 SRGNP10124 158 aa16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 HIBADHP31937 336 aaKnown RBP16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
CDC42SE2-202ENST00000395246 ZNF213O14771 459 aa16.77■□□□□ 0.28
CDC42SE2-202ENST00000395246 NBR1Q14596 966 aa16.77■□□□□ 0.28
CDC42SE2-202ENST00000395246 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.28
CDC42SE2-202ENST00000395246 ATP8A2Q9NTI2 1148 aa16.77■□□□□ 0.28
CDC42SE2-202ENST00000395246 ADD1P35611 737 aaKnown RBP16.77■□□□□ 0.27
CDC42SE2-202ENST00000395246 HELBQ8NG08 1087 aaPredicted RBP16.77■□□□□ 0.27
CDC42SE2-202ENST00000395246 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.27
CDC42SE2-202ENST00000395246 RESTQ13127 1097 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 SPTY2D1Q68D10 685 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 KRT23Q9C075 422 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 LY9Q9HBG7 655 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
CDC42SE2-202ENST00000395246 MYH8P13535 1937 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms