RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
SNCA-204ENST00000394989 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
SNCA-204ENST00000394989 EP400Q96L91 3159 aa16.39■□□□□ 0.21
SNCA-204ENST00000394989 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
SNCA-204ENST00000394989 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
SNCA-204ENST00000394989 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
SNCA-204ENST00000394989 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
SNCA-204ENST00000394989 NGLY1Q96IV0 654 aa16.39■□□□□ 0.21
SNCA-204ENST00000394989 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
SNCA-204ENST00000394989 SCN7AQ01118 1682 aa16.39■□□□□ 0.21
SNCA-204ENST00000394989 KLF18A0A0U1RQI7 1052 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
SNCA-204ENST00000394989 FTOQ9C0B1 505 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNCA-204ENST00000394989 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 WDR19Q8NEZ3 1342 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 APPP05067 770 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
SNCA-204ENST00000394989 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 NEDD4P46934 1319 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 GOLGA8BA8MQT2 603 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 UQCRHP07919 91 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 MAP3K12Q12852 859 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 INCENPQ9NQS7 918 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.37■□□□□ 0.21
SNCA-204ENST00000394989 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
SNCA-204ENST00000394989 MBD4O95243 580 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 CAMK4Q16566 473 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 HS1BP3Q53T59 392 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 BTAF1O14981 1849 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 TBC1D9BQ66K14 1250 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 NR1I2O75469 434 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 CEBPZQ03701 1054 aaKnown RBP16.36■□□□□ 0.21
SNCA-204ENST00000394989 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
SNCA-204ENST00000394989 FNBP4Q8N3X1 1017 aaPredicted RBP16.36■□□□□ 0.21
SNCA-204ENST00000394989 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
SNCA-204ENST00000394989 ZMYM6O95789 1325 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
SNCA-204ENST00000394989 ALX1Q15699 326 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 CFAP45Q9UL16 551 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
SNCA-204ENST00000394989 B4E1Z4 1266 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 USP28Q96RU2 1077 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 CDC5LQ99459 802 aaKnown RBP16.35■□□□□ 0.21
SNCA-204ENST00000394989 NUP62CLQ9H1M0 184 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
SNCA-204ENST00000394989 ZNF804BA4D1E1 1349 aa16.35■□□□□ 0.21
SNCA-204ENST00000394989 CHD4Q14839 1912 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 GSG1L2A8MUP6 293 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 SH2B2O14492 632 aaPredicted RBP16.34■□□□□ 0.21
SNCA-204ENST00000394989 PRKAB2O43741 272 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 TRDNQ13061 729 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 FAM182BQ5T319 152 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 TSC1Q92574 1164 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 ANGEL1Q9UNK9 670 aaKnown RBP16.34■□□□□ 0.21
SNCA-204ENST00000394989 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 LCORLQ8N3X6 602 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 GJB4Q9NTQ9 266 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 USP25Q9UHP3 1055 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 TIAM2Q8IVF5 1701 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 OFD1O75665 1012 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
SNCA-204ENST00000394989 NOL7Q9UMY1 257 aaKnown RBP16.34■□□□□ 0.21
SNCA-204ENST00000394989 GYG1P46976 350 aa16.33■□□□□ 0.21
SNCA-204ENST00000394989 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.21
SNCA-204ENST00000394989 RBM43Q6ZSC3 357 aaKnown RBP16.33■□□□□ 0.21
SNCA-204ENST00000394989 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.21
SNCA-204ENST00000394989 BSDC1Q9NW68 430 aaPredicted RBP16.33■□□□□ 0.21
SNCA-204ENST00000394989 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.21
SNCA-204ENST00000394989 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
SNCA-204ENST00000394989 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
SNCA-204ENST00000394989 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
SNCA-204ENST00000394989 CHMP4CQ96CF2 233 aa16.33■□□□□ 0.2
SNCA-204ENST00000394989 NHSQ6T4R5 1651 aa16.33■□□□□ 0.2
SNCA-204ENST00000394989 COL24A1Q17RW2 1714 aa16.32■□□□□ 0.2
SNCA-204ENST00000394989 DNTTIP2Q5QJE6 756 aaKnown RBP16.32■□□□□ 0.2
SNCA-204ENST00000394989 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
SNCA-204ENST00000394989 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
SNCA-204ENST00000394989 DHX16O60231 1041 aaKnown RBP16.32■□□□□ 0.2
SNCA-204ENST00000394989 RXRAP19793 462 aa16.32■□□□□ 0.2
SNCA-204ENST00000394989 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
SNCA-204ENST00000394989 MIGA1Q8NAN2 632 aa16.32■□□□□ 0.2
SNCA-204ENST00000394989 BICD2Q8TD16 824 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms