RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 RAB11FIP4Q86YS3 637 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 LCORLQ8N3X6 602 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 FBXL16Q8N461 479 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 NCOA7Q8NI08 942 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 INCENPQ9NQS7 918 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 SALL1Q9NSC2 1324 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 MCM5P33992 734 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 RBSNQ9H1K0 784 aa19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
SCNN1A-202ENST00000338748 EVCP57679 992 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 UBE2HP62256 183 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 RALYLQ86SE5 291 aaKnown RBP19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 MIGA1Q8NAN2 632 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 ZNF274Q96GC6 653 aaPredicted RBP19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 NLRP3Q96P20 1036 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 TACC3Q9Y6A5 838 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 NEDD4P46934 1319 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 UBE4AQ14139 1066 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 CYB5R4Q7L1T6 521 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 TTC6Q86TZ1 520 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 HPS5Q9UPZ3 1129 aa19.16■□□□□ 0.66
SCNN1A-202ENST00000338748 TM4SF1P30408 202 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 RFC4P35249 363 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 RPS8P62241 208 aaKnown RBP19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 LRSAM1Q6UWE0 723 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 TPTE2Q6XPS3 522 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 FAM84BQ96KN1 310 aaPredicted RBP19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 LRP2BPQ9P2M1 347 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 GOLGB1Q14789 3259 aaKnown RBP19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 GSG1L2A8MUP6 293 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 RESTQ13127 1097 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 IFNL3Q8IZI9 196 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 BCL11BQ9C0K0 894 aaPredicted RBP19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 ABCF2Q9UG63 623 aa19.15■□□□□ 0.66
SCNN1A-202ENST00000338748 KLF18A0A0U1RQI7 1052 aa19.14■□□□□ 0.65
SCNN1A-202ENST00000338748 NASPP49321 788 aaPredicted RBP19.14■□□□□ 0.65
SCNN1A-202ENST00000338748 NFIXQ14938 502 aa19.14■□□□□ 0.65
SCNN1A-202ENST00000338748 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
SCNN1A-202ENST00000338748 FAM184AQ8NB25 1140 aa19.14■□□□□ 0.65
SCNN1A-202ENST00000338748 SENP2Q9HC62 589 aa19.14■□□□□ 0.65
SCNN1A-202ENST00000338748 B4E1Z4 1266 aa19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 PATL2C9JE40 543 aaKnown RBP19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 QTRT2Q9H974 415 aaKnown RBP19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 TFIP11Q9UBB9 837 aaKnown RBP19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 CACNA1SQ13698 1873 aa19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 GOLGA8BA8MQT2 603 aa19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 PDIA4P13667 645 aaKnown RBP19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 FDPSP14324 419 aaKnown RBP19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 KRT85P78386 507 aa19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 CTDSPL2Q05D32 466 aa19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 ZNF384Q8TF68 577 aa19.13■□□□□ 0.65
SCNN1A-202ENST00000338748 H3BQV1 296 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 ALX1Q15699 326 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 IFFO2Q5TF58 517 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 NAPBQ9H115 298 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 UBR3Q6ZT12 1888 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 ZMYM6O95789 1325 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 TFCP2L1Q9NZI6 479 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 BRWD3Q6RI45 1802 aa19.12■□□□□ 0.65
SCNN1A-202ENST00000338748 CHD4Q14839 1912 aa19.11■□□□□ 0.65
SCNN1A-202ENST00000338748 CARMIL3Q8ND23 1372 aa19.11■□□□□ 0.65
SCNN1A-202ENST00000338748 PNPLA7Q6ZV29 1317 aa19.11■□□□□ 0.65
SCNN1A-202ENST00000338748 CYP7A1P22680 504 aa19.11■□□□□ 0.65
SCNN1A-202ENST00000338748 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
SCNN1A-202ENST00000338748 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
SCNN1A-202ENST00000338748 SMIM22K7EJ46 135 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 GUCY1B3Q02153 619 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 TRDNQ13061 729 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 CAVIN4Q5BKX8 364 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 TXNRD3Q86VQ6 643 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 VPS37DQ86XT2 251 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 RAI14Q9P0K7 980 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 WDR19Q8NEZ3 1342 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 NPHP1O15259 732 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 FBXO33Q7Z6M2 555 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 SDR42E1Q8WUS8 393 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 SYAP1Q96A49 352 aaPredicted RBP19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 TIAM2Q8IVF5 1701 aa19.1■□□□□ 0.65
SCNN1A-202ENST00000338748 SH2B2O14492 632 aaPredicted RBP19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 RXRAP19793 462 aa19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 GNL3LQ9NVN8 582 aaKnown RBP19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 ANGEL1Q9UNK9 670 aaKnown RBP19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 CSPP1Q1MSJ5 1256 aa19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 STK11IPQ8N1F8 1099 aa19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 LEO1Q8WVC0 666 aaPredicted RBP19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 FTOQ9C0B1 505 aaKnown RBP eCLIP19.09■□□□□ 0.65
SCNN1A-202ENST00000338748 TRIM37O94972 964 aa19.08■□□□□ 0.65
SCNN1A-202ENST00000338748 TDO2P48775 406 aa19.08■□□□□ 0.65
SCNN1A-202ENST00000338748 NAA16Q6N069 864 aaPredicted RBP19.08■□□□□ 0.65
SCNN1A-202ENST00000338748 CNBD1Q8NA66 436 aa19.08■□□□□ 0.65
SCNN1A-202ENST00000338748 RNF214Q8ND24 703 aa19.08■□□□□ 0.65
SCNN1A-202ENST00000338748 ELP1O95163 1332 aa19.08■□□□□ 0.64
SCNN1A-202ENST00000338748 OTUD7BQ6GQQ9 843 aa19.08■□□□□ 0.64
SCNN1A-202ENST00000338748 ILDR1Q86SU0 546 aaPredicted RBP19.08■□□□□ 0.64
SCNN1A-202ENST00000338748 RIOK1Q9BRS2 568 aaKnown RBP19.08■□□□□ 0.64
SCNN1A-202ENST00000338748 GJB4Q9NTQ9 266 aa19.08■□□□□ 0.64
SCNN1A-202ENST00000338748 JAG2Q9Y219 1238 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms