RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 STX6O43752 255 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 SLC10A5Q5PT55 438 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 DHX32Q7L7V1 743 aaKnown RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 UFL1O94874 794 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 CLCN1P35523 988 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 CAVIN1Q6NZI2 390 aaKnown RBP10.78□□□□□ -0.68
CD46-202ENST00000322918 TBC1D10CQ8IV04 446 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 MYL10Q9BUA6 226 aa10.78□□□□□ -0.68
CD46-202ENST00000322918 COL5A3P25940 1745 aaPredicted RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 PRC1O43663 620 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 PRDM1O75626 825 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 MMP10P09238 476 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 EVX2Q03828 476 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 TRDNQ13061 729 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 UBE4AQ14139 1066 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 KCNB2Q92953 911 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 INTS4Q96HW7 963 aaKnown RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 STRBPQ96SI9 672 aaKnown RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 PDGFDQ9GZP0 370 aaPredicted RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 AATFQ9NY61 560 aaKnown RBP eCLIP10.77□□□□□ -0.694e-6■□□□□ 10.1
CD46-202ENST00000322918 XRCC6P12956 609 aaKnown RBP eCLIP10.77□□□□□ -0.69
CD46-202ENST00000322918 CEBPZQ03701 1054 aaKnown RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 EZH2Q15910 746 aaKnown RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 ZNF622Q969S3 477 aaKnown RBP eCLIP10.77□□□□□ -0.692e-9■□□□□ 9.2
CD46-202ENST00000322918 PANK2Q9BZ23 570 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 EPB41L4AQ9HCS5 686 aaPredicted RBP10.77□□□□□ -0.69
CD46-202ENST00000322918 CTNNA3Q9UI47 895 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 CNPY2Q9Y2B0 182 aa10.77□□□□□ -0.69
CD46-202ENST00000322918 MYO5AQ9Y4I1 1855 aaKnown RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 BRD1O95696 1058 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 ZSCAN31Q96LW9 406 aaPredicted RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 SENP2Q9HC62 589 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 C4BP0C0L5 1744 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 DDX60Q8IY21 1712 aaKnown RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 F8W031 263 aaPredicted RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 GPSM2P81274 684 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 SCRN1Q12765 414 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 GRAPQ13588 217 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 ANKRD1Q15327 319 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 CDC37L1Q7L3B6 337 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 DEFB132Q7Z7B7 95 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 IFNL3Q8IZI9 196 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 FAM184AQ8NB25 1140 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 GRAPLQ8TC17 118 aaPredicted RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 RGS17Q9UGC6 210 aaPredicted RBP10.76□□□□□ -0.69
CD46-202ENST00000322918 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
CD46-202ENST00000322918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 KLF18A0A0U1RQI7 1052 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 TFIP11Q9UBB9 837 aaKnown RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 BRWD3Q6RI45 1802 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 MAGEB6P1A0A0J9YX57 407 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 GADD45BO75293 160 aaPredicted RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 GRIK5Q16478 980 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 OTUD7BQ6GQQ9 843 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 NFXL1Q6ZNB6 911 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 MICU3Q86XE3 530 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 WDR33Q9C0J8 1336 aaKnown RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 H3BQV1 296 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 POLRMTO00411 1230 aaKnown RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 ZSCAN22P10073 491 aaPredicted RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 MECOMQ03112 1051 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 IFFO2Q5TF58 517 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 DZIP1Q86YF9 867 aaKnown RBP10.75□□□□□ -0.69
CD46-202ENST00000322918 NCOA7Q8NI08 942 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 GJB4Q9NTQ9 266 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 MTMR7Q9Y216 660 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 NEDD4P46934 1319 aa10.75□□□□□ -0.69
CD46-202ENST00000322918 RFX7Q2KHR2 1363 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 GOLGA8BA8MQT2 603 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 GSG1L2A8MUP6 293 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 ADRA2BP18089 450 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 CYB5R4Q7L1T6 521 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 ZNF512BQ96KM6 892 aaPredicted RBP10.74□□□□□ -0.69
CD46-202ENST00000322918 ANKRD2Q9GZV1 360 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 COL1A1P02452 1464 aaPredicted RBP10.74□□□□□ -0.69
CD46-202ENST00000322918 MCM5P33992 734 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 ZNF384Q8TF68 577 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 LMBRD1Q9NUN5 540 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 RTL9Q8NET4 1388 aa10.74□□□□□ -0.69
CD46-202ENST00000322918 SBF2Q86WG5 1849 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 ANTXR2P58335 489 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 TSGA10IPQ3SY00 556 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 CMTR1Q8N1G2 835 aaKnown RBP10.73□□□□□ -0.69
CD46-202ENST00000322918 GTF3C6Q969F1 213 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 IL17RAQ96F46 866 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 AKAP11Q9UKA4 1901 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
CD46-202ENST00000322918 DOK7Q18PE1 504 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
CD46-202ENST00000322918 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms