RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
ABR-202ENST00000302538 MRPS9P82933 396 aaKnown RBP14.85□□□□□ -0.03
ABR-202ENST00000302538 SPC25Q9HBM1 224 aa14.85□□□□□ -0.03
ABR-202ENST00000302538 TRIM75PA6NK02 468 aa14.85□□□□□ -0.03
ABR-202ENST00000302538 NSMFQ6X4W1 530 aa14.85□□□□□ -0.03
ABR-202ENST00000302538 ZNF594Q96JF6 807 aaPredicted RBP14.85□□□□□ -0.03
ABR-202ENST00000302538 ZSCAN16Q9H4T2 348 aaPredicted RBP14.85□□□□□ -0.03
ABR-202ENST00000302538 AATFQ9NY61 560 aaKnown RBP eCLIP14.85□□□□□ -0.03
ABR-202ENST00000302538 ERVV-2B6SEH9 535 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 MCM4P33991 863 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 SYKP43405 635 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 GTF2IP78347 998 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 SLC5A4Q9NY91 659 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 KRT2P35908 639 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 ZNF710Q8N1W2 664 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 TBC1D22AQ8WUA7 517 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 HARSP12081 509 aaKnown RBP14.84□□□□□ -0.03
ABR-202ENST00000302538 PAFAH1B1P43034 410 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 KIF4BQ2VIQ3 1234 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 HS2ST1Q7LGA3 356 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 SKAP1Q86WV1 359 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 RGS22Q8NE09 1264 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 ARMT1Q9H993 441 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 IQGAP3Q86VI3 1631 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 EIF3JO75822 258 aaKnown RBP14.84□□□□□ -0.03
ABR-202ENST00000302538 EP400NLQ6ZTU2 488 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 CERS3Q8IU89 383 aa14.84□□□□□ -0.03
ABR-202ENST00000302538 SPOUT1Q5T280 376 aaKnown RBP14.83□□□□□ -0.03
ABR-202ENST00000302538 GDPD2Q9HCC8 539 aa14.83□□□□□ -0.03
ABR-202ENST00000302538 HOXB7P09629 217 aa14.83□□□□□ -0.04
ABR-202ENST00000302538 RPS8P62241 208 aaKnown RBP14.83□□□□□ -0.04
ABR-202ENST00000302538 ALS2CR12Q96Q35 445 aa14.83□□□□□ -0.04
ABR-202ENST00000302538 PAGR1Q9BTK6 254 aa14.83□□□□□ -0.04
ABR-202ENST00000302538 XAGE2Q96GT9 111 aa14.83□□□□□ -0.04
ABR-202ENST00000302538 MCM7P33993 719 aa14.83□□□□□ -0.04
ABR-202ENST00000302538 NAP1L4Q99733 375 aaKnown RBP14.83□□□□□ -0.04
ABR-202ENST00000302538 M0QZ92 97 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 N4BP3O15049 544 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 CHMP2AO43633 222 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 SLC1A4P43007 532 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 FNBP4Q8N3X1 1017 aaPredicted RBP14.82□□□□□ -0.04
ABR-202ENST00000302538 RBM28Q9NW13 759 aaKnown RBP14.82□□□□□ -0.04
ABR-202ENST00000302538 RXRAP19793 462 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 NUCB1Q02818 461 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 DYDC1Q8WWB3 177 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
ABR-202ENST00000302538 TTF2Q9UNY4 1162 aaKnown RBP14.82□□□□□ -0.04
ABR-202ENST00000302538 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
ABR-202ENST00000302538 MAP3K4Q9Y6R4 1608 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 AS3MTQ9HBK9 375 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 CNGA1P29973 690 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 STX1AQ16623 288 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 FAM182BQ5T319 152 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 ESYT1Q9BSJ8 1104 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 AZI2Q9H6S1 392 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 GRPEL1Q9HAV7 217 aa14.82□□□□□ -0.04
ABR-202ENST00000302538 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 MAPKAPK5Q8IW41 473 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 IL27Q8NEV9 243 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 LPIN2Q92539 896 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 TAOK3Q9H2K8 898 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 OTUD7BQ6GQQ9 843 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 LEKR1Q6ZMV7 388 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 TRIM6Q9C030 488 aaPredicted RBP14.81□□□□□ -0.04
ABR-202ENST00000302538 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 MARCKSP29966 332 aaPredicted RBP14.81□□□□□ -0.04
ABR-202ENST00000302538 ARHGEF6Q15052 776 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 TEKT1Q969V4 418 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 USP40Q9NVE5 1235 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 ATP7BP35670 1465 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 PRR36Q9H6K5 1346 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 GOLGA6L7A0A1B0GV03 622 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 CHL1O00533 1208 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 ARHGEF25Q86VW2 580 aa14.81□□□□□ -0.04
ABR-202ENST00000302538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.81□□□□□ -0.04
ABR-202ENST00000302538 SSFA2P28290 1259 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 IFFO1Q0D2I5 559 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 DCAF15Q66K64 600 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 PKNOX2Q96KN3 472 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 PSMA7O14818 248 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 DOK7Q18PE1 504 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 FAM47CQ5HY64 1035 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 MFSD14BQ5SR56 506 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 TSNARE1Q96NA8 513 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 CWC15Q9P013 229 aaKnown RBP14.8□□□□□ -0.04
ABR-202ENST00000302538 CDC42BPBQ9Y5S2 1711 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 AKR1B10O60218 316 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 HDAC1Q13547 482 aaPredicted RBP14.8□□□□□ -0.04
ABR-202ENST00000302538 KCNG4Q8TDN1 519 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 CLIP2Q9UDT6 1046 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 PRDM1O75626 825 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 GADL1Q6ZQY3 521 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 OTUD6BQ8N6M0 293 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 DHX58Q96C10 678 aa14.8□□□□□ -0.04
ABR-202ENST00000302538 APOBRQ0VD83 1088 aa14.79□□□□□ -0.04
ABR-202ENST00000302538 DHX37Q8IY37 1157 aaKnown RBP14.79□□□□□ -0.04
ABR-202ENST00000302538 USP6P35125 1406 aa14.79□□□□□ -0.04
ABR-202ENST00000302538 LETM2Q2VYF4 491 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms