RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 OVOS2A0A0G2JMS6 1433 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 OVOS2A0A0J9YW53 1432 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 OVOS2Q6IE36 1432 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 ATP7BP35670 1465 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 GJB2P29033 226 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 PDE1AP54750 535 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 CCDC181Q5TID7 509 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 ZNF354CQ86Y25 554 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 TMTC2Q8N394 836 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 NECAB1Q8N987 351 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 CCDC97Q96F63 343 aaPredicted RBP7.31□□□□□ -1.24
BRIP1-201ENST00000259008 PROSER3Q2NL68 480 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 SLC10A4Q96EP9 437 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 BABAM1Q9NWV8 329 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 HMG20BQ9P0W2 317 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 RTL1A6NKG5 1358 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 PHACTR2O75167 634 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 HARSP12081 509 aaKnown RBP7.31□□□□□ -1.24
BRIP1-201ENST00000259008 SDSP20132 328 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 PABPC4Q13310 644 aaKnown RBP eCLIP7.31□□□□□ -1.24
BRIP1-201ENST00000259008 SPC24Q8NBT2 197 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 ALG1Q9BT22 464 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 CLIP2Q9UDT6 1046 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 B4E1Z4 1266 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 CHL1O00533 1208 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 LPXNO60711 386 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 IGHDP01880 384 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 OSBPP22059 807 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 TBC1D9BQ66K14 1250 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 DPP9Q86TI2 863 aa7.31□□□□□ -1.24
BRIP1-201ENST00000259008 ARHGEF1Q92888 912 aaKnown RBP7.31□□□□□ -1.24
BRIP1-201ENST00000259008 UBA7P41226 1012 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 CRB1P82279 1406 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 TRIM35Q9UPQ4 493 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 ALKQ9UM73 1620 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 ZNF532Q9HCE3 1301 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 RPS6KA4O75676 772 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 HOXB7P09629 217 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 STXBP4Q6ZWJ1 553 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 LIMCH1Q9UPQ0 1083 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 M0QZ92 97 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 LETM1O95202 739 aaPredicted RBP7.3□□□□□ -1.24
BRIP1-201ENST00000259008 CFBP00751 764 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 TNNT3P45378 269 aaPredicted RBP7.3□□□□□ -1.24
BRIP1-201ENST00000259008 SUPT20HL1Q3ZLR7 823 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 SYNE4Q8N205 404 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 TSPY26PQ9H489 355 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 FRMPD2Q68DX3 1309 aaPredicted RBP7.3□□□□□ -1.24
BRIP1-201ENST00000259008 CCDC171Q6TFL3 1326 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 CDC42BPBQ9Y5S2 1711 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 TRIM75PA6NK02 468 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 FMNL1O95466 1100 aaPredicted RBP7.3□□□□□ -1.24
BRIP1-201ENST00000259008 MCM7P33993 719 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 HMGN5P82970 282 aaKnown RBP7.3□□□□□ -1.24
BRIP1-201ENST00000259008 LRRC24Q50LG9 513 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 CSRNP1Q96S65 589 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 SH2B1Q9NRF2 756 aaPredicted RBP7.3□□□□□ -1.24
BRIP1-201ENST00000259008 DIP2BQ9P265 1576 aa7.3□□□□□ -1.24
BRIP1-201ENST00000259008 IREB2P48200 963 aaKnown RBP7.29□□□□□ -1.24
BRIP1-201ENST00000259008 APOBRQ0VD83 1088 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 ATG3Q9NT62 314 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 SYNMO15061 1565 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 CLTCL1P53675 1640 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 AMPD3Q01432 767 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 CERKLQ49MI3 558 aaPredicted RBP7.29□□□□□ -1.24
BRIP1-201ENST00000259008 CNNM3Q8NE01 707 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 PLIN2Q99541 437 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 GRIN3BO60391 1043 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 FLOT1O75955 427 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 ALAS1P13196 640 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 ISM2Q6H9L7 571 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.29□□□□□ -1.248e-7■■□□□ 13.2
BRIP1-201ENST00000259008 ANGEL1Q9UNK9 670 aaKnown RBP7.29□□□□□ -1.24
BRIP1-201ENST00000259008 SOS1Q07889 1333 aaPredicted RBP7.29□□□□□ -1.24
BRIP1-201ENST00000259008 FER1L4A9Z1Z3 1794 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 USP17L3A6NCW0 530 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 USP17L4A6NCW7 530 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 PCCAP05165 728 aaPredicted RBP7.29□□□□□ -1.24
BRIP1-201ENST00000259008 TNNT1P13805 278 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 CCDC40Q4G0X9 1142 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 MAEAQ7L5Y9 396 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 USP17L1Q7RTZ2 530 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 BBOX1O75936 387 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 NUCB1Q02818 461 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 SUSD4Q5VX71 490 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 TTC41PQ6P2S7 1318 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 KDRP35968 1356 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 COL15A1P39059 1388 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 C1orf167Q5SNV9 1468 aa7.29□□□□□ -1.24
BRIP1-201ENST00000259008 RNF17Q9BXT8 1623 aaKnown RBP7.29□□□□□ -1.24
BRIP1-201ENST00000259008 DIP2CQ9Y2E4 1556 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 GPAA1O43292 621 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 ARHGEF16Q5VV41 709 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 ANKRD35Q8N283 1001 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 RNF169Q8NCN4 708 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 NBPF3Q9H094 633 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 AZI2Q9H6S1 392 aa7.28□□□□□ -1.24
BRIP1-201ENST00000259008 SPATA31A1Q5TZJ5 1347 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms