RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TAF7LQ5H9L4 462 aa15.46■□□□□ 0.06
SRP54-201ENST00000216774 UTP14CQ5TAP6 766 aaKnown RBP15.46■□□□□ 0.06
SRP54-201ENST00000216774 ANO1Q5XXA6 986 aa15.46■□□□□ 0.06
SRP54-201ENST00000216774 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.06
SRP54-201ENST00000216774 ATRNO75882 1429 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 A0A087WWV3 80 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 SLC3A2P08195 630 aaKnown RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 TPM4P67936 248 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 DPCR1Q3MIW9 517 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 NBPF11Q86T75 865 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 CCAR2Q8N163 923 aaKnown RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 ZBTB38Q8NAP3 1195 aaPredicted RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 ZNF512BQ96KM6 892 aaPredicted RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 CGNQ9P2M7 1197 aaKnown RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 PRDM4Q9UKN5 801 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 STRCP1A6NGW2 1772 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 USP27XA6NNY8 438 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 ZNF202O95125 648 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 IL2RBP14784 551 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 NLRP12P59046 1061 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 AXDND1Q5T1B0 1012 aaPredicted RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 CCDC150Q8NCX0 1101 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 ERCC4Q92889 916 aaPredicted RBP15.45■□□□□ 0.06
SRP54-201ENST00000216774 TIGD1Q96MW7 591 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 PRDM11Q9NQV5 511 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 MYH7P12883 1935 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 ZMYM6O95789 1325 aa15.45■□□□□ 0.06
SRP54-201ENST00000216774 COL5A2P05997 1499 aaPredicted RBP15.44■□□□□ 0.06
SRP54-201ENST00000216774 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 C4BP0C0L5 1744 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 CDKL5O76039 1030 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 ZSCAN20P17040 1043 aaPredicted RBP15.44■□□□□ 0.06
SRP54-201ENST00000216774 CBX1P83916 185 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 DMTNQ08495 405 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 TRDNQ13061 729 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 KIF6Q6ZMV9 814 aa15.44■□□□□ 0.06
SRP54-201ENST00000216774 TEX13AQ9BXU3 409 aaPredicted RBP15.44■□□□□ 0.06
SRP54-201ENST00000216774 ANGEL1Q9UNK9 670 aaKnown RBP15.44■□□□□ 0.06
SRP54-201ENST00000216774 KIF28PB7ZC32 967 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 KCNJ6P48051 423 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 SLC39A14Q15043 492 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
SRP54-201ENST00000216774 CARD10Q9BWT7 1032 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 SHANK3Q9BYB0 1731 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 CDHR2Q9BYE9 1310 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 PFKFB1P16118 471 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
SRP54-201ENST00000216774 IKBKBO14920 756 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 U2AF2P26368 475 aaKnown RBP eCLIP15.42■□□□□ 0.061e-7■■■■■ 102.2
SRP54-201ENST00000216774 ADD2P35612 726 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 FAM89AQ96GI7 184 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 MCAMP43121 646 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 PI16Q6UXB8 463 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 JMYQ8N9B5 988 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 KIF18AQ8NI77 898 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 FBXW7Q969H0 707 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
SRP54-201ENST00000216774 XPO4Q9C0E2 1151 aaKnown RBP15.42■□□□□ 0.06
SRP54-201ENST00000216774 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
SRP54-201ENST00000216774 SH2B2O14492 632 aaPredicted RBP15.41■□□□□ 0.06
SRP54-201ENST00000216774 PPP6R2O75170 966 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 CPLX2Q6PUV4 134 aaKnown RBP15.41■□□□□ 0.06
SRP54-201ENST00000216774 OGFRQ9NZT2 677 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 FAM237AA0A1B0GTK4 181 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 NRDCO43847 1150 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 SMC2O95347 1197 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 METAP2P50579 478 aaKnown RBP eCLIP15.41■□□□□ 0.06
SRP54-201ENST00000216774 NCAPHQ15003 741 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 PRDM10Q9NQV6 1147 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 GJB4Q9NTQ9 266 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 IFNKQ9P0W0 207 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 HPSEQ9Y251 543 aa15.41■□□□□ 0.06
SRP54-201ENST00000216774 MROH7-TTC4A0A0A0MT08 1334 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 AKAP11Q9UKA4 1901 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 PSDA5PKW4 1024 aaPredicted RBP15.4■□□□□ 0.06
SRP54-201ENST00000216774 WDHD1O75717 1129 aaPredicted RBP15.4■□□□□ 0.06
SRP54-201ENST00000216774 TUBB4AP04350 444 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 SFPQP23246 707 aaKnown RBP eCLIP15.4■□□□□ 0.06
SRP54-201ENST00000216774 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 LDHAL6AQ6ZMR3 332 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 VPS37DQ86XT2 251 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 TMEM87BQ96K49 555 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 TMOD3Q9NYL9 352 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 TUBE1Q9UJT0 475 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 GIGYF2Q6Y7W6 1299 aaKnown RBP15.4■□□□□ 0.06
SRP54-201ENST00000216774 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 TBC1D10CQ8IV04 446 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 ERO1AQ96HE7 468 aa15.4■□□□□ 0.06
SRP54-201ENST00000216774 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
SRP54-201ENST00000216774 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
SRP54-201ENST00000216774 TOGARAM1Q9Y4F4 1720 aa15.39■□□□□ 0.05
SRP54-201ENST00000216774 SPDYE4A6NLX3 237 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms