RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Smarcc2Q6PDG5 1213 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Srp68Q8BMA6 625 aaKnown RBP11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Wdr64Q9D565 1086 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Ripk4Q9ERK0 786 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Dusp10Q9ESS0 483 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Siglec1Q62230 1695 aa11.73□□□□□ -0.53
Usp4-209ENSMUST00000194959 Lmtk3Q5XJV6 1424 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Dynll1P63168 89 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cyp24a1Q64441 514 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Kiaa0754Q69ZZ9 979 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Srek1Q8BZX4 494 aaKnown RBP11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Nup133Q8R0G9 1155 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tomm22Q9CPQ3 142 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Irs4Q9Z0Y7 1216 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 1700029H14RikE9PY36 240 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 TrdnE9Q9K5 693 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Slc39a11Q8BWY7 342 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Luzp1Q8R4U7 1068 aaKnown RBP11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Tfcp2Q9ERA0 502 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Celf1P28659 486 aaKnown RBP11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Plcb3P51432 1234 aaKnown RBP11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Hmgn5Q9JL35 406 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Letm1Q9Z2I0 738 aa11.72□□□□□ -0.53
Usp4-209ENSMUST00000194959 Scn4aQ9ER60 1841 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Kcnh4A2A5F7 1018 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Prss40A6H6T1 365 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Gm20425E9Q035 978 aaKnown RBP11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 RdxP26043 583 aaKnown RBP11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 SrprbP47758 269 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Cep120Q7TSG1 988 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Kcnf1Q7TSH7 493 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Golph3lQ8R088 285 aaKnown RBP11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 Zfp142G5E869 1843 aa11.71□□□□□ -0.53
Usp4-209ENSMUST00000194959 NcapgE9PWG6 1004 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ptgs1P22437 602 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Dusp9Q7TNL7 452 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Bola3Q8CEI1 110 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Nop14Q8R3N1 860 aaKnown RBP11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Stxbp4Q9WV89 557 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Sik3Q6P4S6 1311 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Kdm3aQ6PCM1 1323 aa11.71□□□□□ -0.54
Usp4-209ENSMUST00000194959 Pde6aP27664 859 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Plbd2Q3TCN2 594 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Znf526Q8BI66 675 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Chrna2Q91X60 512 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ube3bQ9ES34 1070 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Dennd3A2RT67 1274 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Gm4340L7N2C4 268 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Stx8O88983 236 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Myo1bP46735 1107 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Slc38a10Q5I012 1090 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 WtapQ9ER69 396 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Nbr1P97432 988 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Cfap157Q0VFX2 523 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ube3cQ80U95 1083 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Zfp202Q8C879 641 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Sugp2Q8CH09 1067 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Rbm42Q91V81 474 aaKnown RBP11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Osbpl5Q9ER64 874 aa11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ybx3Q9JKB3 361 aaKnown RBP11.7□□□□□ -0.54
Usp4-209ENSMUST00000194959 Stx1aO35526 288 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Tpm2P58774 284 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ccdc162pQ0VG85 912 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ginm1Q91WR6 327 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Gm973E9Q295 1059 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Atp1b3P97370 278 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Slu7Q8BHJ9 585 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Slc14a2Q8R4T9 930 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Pcdhb22Q91XZ8 794 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Slc5a4bQ91ZP4 660 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 HelbQ6NVF4 1074 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Pdcl2Q78Y63 240 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Clic6Q8BHB9 596 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Adam1bQ8R534 806 aa11.69□□□□□ -0.54
Usp4-209ENSMUST00000194959 Hmx1O70218 332 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Tlr8P58682 1032 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ift122Q6NWV3 1182 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Fchsd1Q6PFY1 688 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Gimap8Q75N62 688 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ubac1Q8VDI7 409 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Trim59Q922Y2 403 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Snw1Q9CSN1 536 aaKnown RBP11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Gja10Q9WUS4 505 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Shank2Q80Z38 1476 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Nmt2O70311 529 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Rbm15bQ6PHZ5 887 aaKnown RBP11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Glis3Q6XP49 780 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ctdspl2Q8BG15 465 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 RarsQ9D0I9 660 aaKnown RBP11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 BcorQ8CGN4 1759 aa11.68□□□□□ -0.54
Usp4-209ENSMUST00000194959 Tcof1O08784 1320 aaKnown RBP11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Pfkfb1P70266 471 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Ccdc174Q3U155 467 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Gse1Q3U3C9 1213 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Large1Q9Z1M7 756 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Atp12aQ9Z1W8 1035 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Setdb1O88974 1307 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Cyp3a59D3Z2W7 503 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 Prl7d1P04769 244 aa11.67□□□□□ -0.54
Usp4-209ENSMUST00000194959 XpcP51612 930 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms