RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Palm3A2TJV2 734 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Akap2O54931 893 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cdan1Q8CC12 1239 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ufl1Q8CCJ3 793 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Rab3il1Q8VDV3 383 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Spc24Q9D083 201 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Lnx1O70263 728 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 MarcksP26645 309 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Rnf216P58283 853 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ddx49Q4FZF3 480 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Csrnp2Q8BGQ2 534 aa13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 PpanQ91YU8 470 aaKnown RBP13.18□□□□□ -0.3
Ndc1-204ENSMUST00000139560 1700113H08RikE9Q9Q5 327 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Lig3P97386 1015 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Adora1Q60612 326 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Arhgef2Q60875 985 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tbc1d5Q80XQ2 815 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Nod2Q8K3Z0 1020 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ube3aO08759 870 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Eef1dP57776 281 aaKnown RBP13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Specc1Q5SXY1 1067 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Etf1Q8BWY3 437 aaKnown RBP13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Sde2Q8K1J5 448 aaKnown RBP13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Smtnl1Q99LM3 459 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 TnksQ6PFX9 1320 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Zfp853A0A1D5RM95 733 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Pcdhb15Q91Y04 786 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Mx2Q9WVP9 655 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Kdm3aQ6PCM1 1323 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Arhgef12Q8R4H2 1543 aaKnown RBP13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Abcc2Q8VI47 1543 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cops6O88545 324 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ankrd13cQ3UX43 541 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tubgcp2Q921G8 905 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 NapgQ9CWZ7 312 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cul5Q9D5V5 780 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Pkd2l2Q9JLG4 621 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Uso1Q9Z1Z0 959 aaKnown RBP13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Lrrc9Q8CDN9 1456 aa13.17□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Rsph10bE9PYQ0 876 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Pde11aP0C1Q2 933 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Rrp1P56183 494 aaKnown RBP13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 MmeQ61391 750 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Astn2Q80Z10 1352 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ptch1Q61115 1434 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cpsf1Q9EPU4 1441 aaKnown RBP13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Hsf2bpQ9D4G2 338 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Setdb1O88974 1307 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Klhl7Q8BUL5 586 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ebag9Q9D0V7 213 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Spata31d1bE9QA57 1361 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 PalldQ9ET54 1408 aa13.16□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Zfp213E9QAW0 468 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Dact3Q0PHV7 610 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Nom1Q3UFM5 854 aaKnown RBP13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tekt3Q6X6Z7 490 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ppp2r3dQ9Z176 491 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ccdc6D3YZP9 469 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Dnajc21E9Q8D0 531 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Gm10378F6XQQ1 160 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Zfp42P22227 288 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Pde6bP23440 856 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ca8P28651 291 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Kiaa1211Q5PR69 1207 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Unc5clQ6R653 518 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Nxf7Q80SZ6 620 aaKnown RBP13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Gm1993A6X8I0 212 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 SlxD3Z347 212 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ctnna2Q61301 953 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Tgfb1i1Q62219 461 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Ppp4r3aQ6P2K6 820 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Arl8aQ8VEH3 186 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Nop2Q922K7 793 aaKnown RBP13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Dydc2Q9D3X8 139 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Cd274Q9EP73 290 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Irs4Q9Z0Y7 1216 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Lrrc7Q80TE7 1490 aa13.15□□□□□ -0.3
Ndc1-204ENSMUST00000139560 Pfkfb1P70266 471 aa13.15□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Rapgef1Q3UHC1 1224 aa13.15□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gramd4Q8CB44 633 aa13.15□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Rdm1Q9CQK3 281 aa13.15□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Msl1Q6PDM1 616 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Zkscan8Q8BSL0 588 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Adcy10Q8C0T9 1614 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gm16486A0A1D5RMD1 1434 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ano8Q6PB70 1060 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Bicd1Q8BR07 835 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Sec62Q8BU14 398 aaKnown RBP13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 P2rx7Q9Z1M0 595 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mtmr7Q9Z2C9 660 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Jdp2P97875 163 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Tcerg1lQ3B807 590 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mrpl50Q8VDT9 159 aaKnown RBP13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Kdm3bQ6ZPY7 1562 aa13.14□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gm30191A0A0U1RNT7 187 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ankrd35E9Q9D8 996 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Csrnp1P59054 583 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Sgsm2Q80U12 1005 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Rassf2Q8BMS9 326 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Cplx3Q8R1B5 158 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms