RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Ddx27Q921N6 760 aaKnown RBP16.83■□□□□ 0.28
Msx3-201ENSMUST00000055353 Stxbp4Q9WV89 557 aa16.83■□□□□ 0.28
Msx3-201ENSMUST00000055353 Magi2Q9WVQ1 1275 aa16.83■□□□□ 0.28
Msx3-201ENSMUST00000055353 Gm43638A0A0J9YU36 694 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Gm20425E9Q035 978 aaKnown RBP16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 LtkP08923 888 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 SrprbP47758 269 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Epha2Q03145 977 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Tmed8Q3UHI4 326 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Nol10Q5RJG1 687 aaKnown RBP16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Mei4Q8BRM6 389 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Lmod1Q8BVA4 595 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ift57Q8BXG3 429 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Otud6bQ8K2H2 294 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 MbipQ99LQ1 341 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Pcdh10E9PXQ7 1057 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 Larp6Q8BN59 492 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 CenpqQ9CPQ5 267 aa16.82■□□□□ 0.28
Msx3-201ENSMUST00000055353 1700017N19RikA0A087WPJ1 469 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Slc1a4O35874 532 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Dnm1P39053 867 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Gm28047Q3US59 414 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ccnl1Q52KE7 532 aaKnown RBP16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Usp13Q5BKP2 858 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Sptlc3Q8BG54 563 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Yeats4Q9CR11 227 aaKnown RBP16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Col3a1P08121 1464 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Casz1Q9CWL2 1761 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Prl2c1Q5SVL9 228 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Pcdhb14Q6PB90 796 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Igsf3Q6ZQA6 1194 aa16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ppil4Q9CXG3 492 aaKnown RBP16.81■□□□□ 0.28
Msx3-201ENSMUST00000055353 Plekhd1B2RPU2 505 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Pcdhb9E9Q5G2 828 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Taf3Q5HZG4 932 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 AbraQ8BUZ1 375 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Srek1Q8BZX4 494 aaKnown RBP16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 ImmtQ8CAQ8 757 aaKnown RBP16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Nlrp9aQ66X03 949 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ranbp6Q8BIV3 1105 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Dnaaf4Q8R368 420 aa16.8■□□□□ 0.28
Msx3-201ENSMUST00000055353 Metap2O08663 478 aaKnown RBP16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ppp4r3bQ922R5 820 aa16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 4930548H24RikQ9D496 437 aa16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Col18a1P39061 1774 aa16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Crb1Q8VHS2 1405 aa16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Smg7Q5RJH6 1138 aaKnown RBP16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Panx2Q6IMP4 677 aa16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Odf2lQ9D478 642 aa16.79■□□□□ 0.28
Msx3-201ENSMUST00000055353 Cdc27A2A6Q5 825 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Pde6aP27664 859 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Grin1P35438 938 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Cplx1P63040 134 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Tmem87aQ8BXN9 555 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Rec8Q8C5S7 591 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Kri1Q8VDQ9 704 aaKnown RBP16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Eaf2Q91ZD6 262 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Zbtb43Q9DAI4 467 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Rgs12Q8CGE9 1381 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Wdr19Q3UGF1 1341 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Cyp3a59D3Z2W7 503 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Gm10134F6ZQC6 126 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Me1P06801 572 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Zbtb38Q3LR78 1197 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Nip7Q9CXK8 180 aaKnown RBP16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Atp12aQ9Z1W8 1035 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 CpdO89001 1377 aa16.78■□□□□ 0.28
Msx3-201ENSMUST00000055353 Atp8b5A3FIN4 1183 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Bin2D3Z6Q9 489 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Mctp2Q5RJH2 878 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Haus7Q8BKT8 364 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Smim5Q8BT42 78 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Bola3Q8CEI1 110 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ces1dQ8VCT4 565 aa16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Ddx41Q91VN6 622 aaKnown RBP16.77■□□□□ 0.28
Msx3-201ENSMUST00000055353 Naaladl2A0A0N4SUJ3 795 aa16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 Pde4bB1AWC9 736 aa16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 Dnajc2P54103 621 aaKnown RBP16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 Pla2g4fQ50L41 855 aa16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 Prpf4bQ61136 1007 aaKnown RBP16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 CtcfQ61164 736 aaKnown RBP16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 Fam160b2Q80YR2 744 aa16.77■□□□□ 0.27
Msx3-201ENSMUST00000055353 Glis3Q6XP49 780 aa16.76■□□□□ 0.27
Msx3-201ENSMUST00000055353 Cep120Q7TSG1 988 aa16.76■□□□□ 0.27
Msx3-201ENSMUST00000055353 IcoslgQ9JHJ8 322 aa16.76■□□□□ 0.27
Msx3-201ENSMUST00000055353 Ms4a1P19437 291 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Znf653Q6YND2 615 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Kcnj14Q8JZN3 434 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 ApobrQ8VBT6 942 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Lrrc59Q922Q8 307 aaKnown RBP16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Filip1Q9CS72 1211 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Cops6O88545 324 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Zhx1P70121 873 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Atp8a2P98200 1148 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Cdc37Q61081 379 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Arl8aQ8VEH3 186 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Pcdhb22Q91XZ8 794 aa16.75■□□□□ 0.27
Msx3-201ENSMUST00000055353 Diaph1O08808 1255 aa16.74■□□□□ 0.27
Msx3-201ENSMUST00000055353 Pip4k2bQ80XI4 416 aa16.74■□□□□ 0.27
Msx3-201ENSMUST00000055353 Slfnl1Q8BHW9 410 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms