RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tsr1Q5SWD9 803 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 KaznQ69ZS8 779 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rbm42Q91V81 474 aaKnown RBP11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Mcur1Q9CXD6 340 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 RabggtaQ9JHK4 567 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Skint5A7XUY5 1461 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 SkiQ60698 725 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Usp37Q8C0R0 979 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Lmbr1lQ9D1E5 489 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Mapkbp1Q6NS57 1503 aa11.39□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Pde4dQ01063 747 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ell2Q3UKU1 639 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Dnaaf2Q8BPI1 814 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cul5Q9D5V5 780 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 MlecQ6ZQI3 291 aaKnown RBP11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Atad3Q925I1 591 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 RpgrQ9R0X5 1001 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Dennd3A2RT67 1274 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Slc30a9Q5IRJ6 567 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Luc7l3Q5SUF2 432 aaKnown RBP11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Trove2O08848 538 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Cdc23Q8BGZ4 597 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Kif17Q99PW8 1038 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Drc1Q3USS3 753 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Slc5a1Q8C3K6 665 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Creld2Q9CYA0 350 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Evi5P97366 809 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Psmd1Q3TXS7 953 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ppp2r5bQ6PD28 497 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Acnat2Q8BGG9 420 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ints4Q8CIM8 964 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Filip1Q9CS72 1211 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Clip2Q9Z0H8 1047 aa11.38□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Card6E9PWH2 1175 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Spg7Q3ULF4 781 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ccdc25Q78PG9 208 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 DlatQ8BMF4 642 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 SdsQ8VBT2 327 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tpx2A2APB8 745 aaKnown RBP11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Pak1O88643 545 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Stx8O88983 236 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 CalcaP70160 136 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Hook2Q7TMK6 716 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ccdc28aQ8CEI3 192 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 AdnpQ9Z103 1108 aaKnown RBP11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ppp2r5eQ61151 467 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Sdccag8Q80UF4 717 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Fermt2Q8CIB5 680 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Bicc1Q99MQ1 977 aaKnown RBP11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Astn2Q80Z10 1352 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Atp2b3Q0VF55 1220 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Pex1Q5BL07 1284 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Igf2bp2Q5SF07 592 aaKnown RBP11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Igsf3Q6ZQA6 1194 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Sgsm2Q80U12 1005 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Lmod1Q8BVA4 595 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Syap1Q9D5V6 365 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Hfm1D3Z4R1 1434 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Csrnp2Q8BGQ2 534 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Frmpd2A0A140LI67 1392 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Sf3b2Q3UJB0 878 aaKnown RBP11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rad17Q6NXW6 688 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tpcn2Q8BWC0 731 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Osbpl1aQ91XL9 950 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Mxra7Q9CZH7 178 aa11.37□□□□□ -0.59
Ubr1-201ENSMUST00000028728 1700113H08RikE9Q9Q5 327 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Eif4a2P10630 407 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 SfswapQ3USH5 945 aaKnown RBP11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Chrna2Q91X60 512 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Bcl11bQ99PV8 884 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 OvosQ3UU35 1456 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Neo1P97798 1493 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Apol10bG3X9K7 334 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Slc1a4O35874 532 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tcerg1lQ3B807 590 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 GckrQ91X44 587 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Bicdl1A0JNT9 577 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Q4VA45 678 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 AatfQ9JKX4 526 aaKnown RBP11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 PalldQ9ET54 1408 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Sh2d4bA6X942 431 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Atp2a2O55143 1044 aaKnown RBP11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ppp1r7Q3UM45 361 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rab44Q8CB87 725 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Spata31d1bE9QA57 1361 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Abcc6Q9R1S7 1498 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Pde11aP0C1Q2 933 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Tcp1P11983 556 aaKnown RBP11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Slc12a2P55012 1205 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Fhdc1Q3ULZ2 1149 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Rbbp5Q8BX09 538 aaKnown RBP11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Nphp4P59240 1425 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Bfsp1A2AMT1 669 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Camk4P08414 469 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Samsn1P57725 372 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ppp1r1bQ60829 194 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Ccpg1Q640L3 753 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Kank4Q6P9J5 1016 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Nup58Q8R332 587 aa11.36□□□□□ -0.59
Ubr1-201ENSMUST00000028728 Usp11Q99K46 921 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 361 ms