RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Rcan1Q9JHG6 198 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tulp1Q9Z273 543 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sh3tc1G3X9F6 1346 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ubn2Q80WC1 1314 aa9.77□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Foxp1P58462 705 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Pald1P70261 859 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Slc38a10Q5I012 1090 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Otud6bQ8K2H2 294 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Syt10Q9R0N4 523 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Wdr78E9PYY5 807 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Pcdhb9E9Q5G2 828 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Slc44a1Q6X893 653 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Kif1bpQ6ZPU9 617 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 NsmfQ99NF2 532 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ybx3Q9JKB3 361 aaKnown RBP9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Zfp804bA0A0G2JGH6 1343 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Kcnb2A6H8H5 907 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Gm20425E9Q035 978 aaKnown RBP9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 SrprbP47758 269 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Wdhd1P59328 1117 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Kmt5bQ3U8K7 883 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 RtcbQ99LF4 505 aaKnown RBP9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tomm22Q9CPQ3 142 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ftsj3Q9DBE9 838 aaKnown RBP9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 IntuQ059U7 942 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Mst1rQ62190 1378 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Slc1a4O35874 532 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ppfia3P60469 1194 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Lrrfip1Q3UZ39 729 aaKnown RBP9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tcp11l1Q8BTG3 509 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 CenpqQ9CPQ5 267 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 RarsQ9D0I9 660 aaKnown RBP9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tubb4aQ9D6F9 444 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tbc1d8Q9Z1A9 1134 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sel1lQ9Z2G6 790 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sipa1l2Q80TE4 1722 aa9.76□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 GnaqP21279 359 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ercc3P49135 783 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Smarcc2Q6PDG5 1213 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cep120Q7TSG1 988 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 9230110C19RikQ8CC70 267 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Gtf3c5Q8R2T8 520 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Stox1B2RQL2 990 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Stim1P70302 685 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tmtc2Q56A06 836 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Nat10Q8K224 1024 aaKnown RBP9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Plcd3Q8K2J0 785 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Nup133Q8R0G9 1155 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Il17raQ60943 864 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Znf653Q6YND2 615 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 DlatQ8BMF4 642 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Bola3Q8CEI1 110 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Acot9Q9R0X4 439 aaKnown RBP9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Wdr19Q3UGF1 1341 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Pdia4P08003 638 aaKnown RBP9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cd22P35329 862 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tmed8Q3UHI4 326 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 PtprvP70289 1705 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Bag1Q60739 355 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cyp24a1Q64441 514 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Smim5Q8BT42 78 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Rps6ka4Q9Z2B9 773 aa9.75□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Gcom1E9PZ54 550 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 CltaO08585 235 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Cyp19a1P28649 503 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 MyzapQ3UIJ9 466 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Rbm43Q99J64 343 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Zscan29E9Q5B4 869 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Myo1bP46735 1107 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Bach2P97303 839 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Acnat2Q8BGG9 420 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Letm1Q9Z2I0 738 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Alpk3Q924C5 1678 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Crb1Q8VHS2 1405 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Pet2A2AHY8 747 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tuft1O08970 390 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Casp1P29452 402 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Exosc10P56960 887 aaKnown RBP9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Prdm1Q60636 856 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 SelenooQ9DBC0 667 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Eif5P59325 429 aaKnown RBP9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Ccdc174Q3U155 467 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Zkscan4Q5SZT6 480 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Sik3Q6P4S6 1311 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tango6Q8C3S2 1079 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Naa30Q8CES0 364 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Phldb2Q8K1N2 1249 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 St5Q924W7 1134 aa9.74□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 InhbeO08717 350 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Mroh6V9GX81 722 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Tex2Q6ZPJ0 1128 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Nxf7Q80SZ6 620 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Alx1Q8C8B0 326 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Rbm10Q99KG3 930 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Baiap2l1Q9DBJ3 514 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Foxo4Q9WVH3 505 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 GabrdP22933 449 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 Il15P48346 162 aa9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 HmcesQ8R1M0 353 aaKnown RBP9.73□□□□□ -0.85
Sf3b1-201ENSMUST00000027127 HdlbpQ8VDJ3 1268 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms