RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cyp26a1O55127 497 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Znf326O88291 580 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Pard3Q99NH2 1333 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Prdm1Q60636 856 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Ift57Q8BXG3 429 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Riok1Q922Q2 567 aa21.72■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Lrp5Q91VN0 1614 aa21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Myh1Q5SX40 1942 aa21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Metap2O08663 478 aaKnown RBP21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Acap3Q6NXL5 833 aa21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Acnat2Q8BGG9 420 aa21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Kri1Q8VDQ9 704 aaKnown RBP21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Acot9Q9R0X4 439 aaKnown RBP21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Cdhr2E9Q7P9 1308 aa21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Ankrd31A0A140LI88 1765 aa21.71■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Prl3d1P18121 224 aa21.7■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Zbtb38Q3LR78 1197 aa21.7■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Ankrd1Q9CR42 319 aa21.7■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Filip1Q9CS72 1211 aa21.7■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Sept12Q9D451 317 aa21.7■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Zbtb43Q9DAI4 467 aa21.7■■□□□ 1.07
Shkbp1-201ENSMUST00000003857 Grin2dQ03391 1323 aa21.7■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Llgl2Q3TJ91 1027 aa21.7■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Sptlc3Q8BG54 563 aa21.7■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Ssc5dQ8BV57 1371 aa21.7■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Znf568E9PYI1 671 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Pde6aP27664 859 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Panx2Q6IMP4 677 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Ehd2Q8BH64 543 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Frmd3Q8BHD4 595 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Bola3Q8CEI1 110 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Scn4aQ9ER60 1841 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Sept1P42209 366 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Epha2Q03145 977 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Sil1Q9EPK6 465 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Large1Q9Z1M7 756 aa21.69■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Cops6O88545 324 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Cdkl5Q3UTQ8 938 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 IbspQ61711 324 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Tbc1d7Q9D0K0 293 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Myh2G3UW82 1942 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Med23Q80YQ2 1367 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Taf3Q5HZG4 932 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Pcdhb14Q6PB90 796 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Rec8Q8C5S7 591 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 DymQ8CHY3 669 aa21.68■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Akap11E9Q777 1895 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Naaladl2A0A0N4SUJ3 795 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Casp12O08736 419 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Tnnt2P50752 301 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 ApobrQ8VBT6 942 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Dhx30Q99PU8 1217 aaKnown RBP21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Lrp6O88572 1613 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Me1P06801 572 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Cplx1P63040 134 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Nbr1P97432 988 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 IqcgQ80W32 419 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Vps37dQ810I0 261 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Vps33aQ9D2N9 598 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Setdb1O88974 1307 aa21.67■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Cfap44E9Q5M6 1843 aa21.66■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Pde8bE9Q4S1 865 aa21.66■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Gpr108Q91WD0 569 aa21.66■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Nip7Q9CXK8 180 aaKnown RBP21.66■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Mast3Q3U214 1321 aa21.66■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Lrrc2Q8VDB8 371 aa21.66■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Dnm1P39053 867 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Cplx2P84086 134 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Cdc37Q61081 379 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Ranbp6Q8BIV3 1105 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 CenpqQ9CPQ5 267 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Bin2D3Z6Q9 489 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Usp13Q5BKP2 858 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Dnm3Q8BZ98 863 aa21.65■■□□□ 1.06
Shkbp1-201ENSMUST00000003857 Tpm1P58771 284 aa21.64■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 NenfQ9CQ45 171 aa21.64■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ccdc47Q9D024 483 aaKnown RBP21.64■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Dctpp1Q9QY93 170 aa21.64■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Plekhf1Q3TB82 279 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 MbipQ99LQ1 341 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Krt84Q99M73 603 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Elf2Q9JHC9 593 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Foxo4Q9WVH3 505 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Vnn1Q9Z0K8 512 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Sycp2lA0A0M3U1B0 842 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Plbd2Q3TCN2 594 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Eaf2Q91ZD6 262 aa21.63■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 MetP16056 1379 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Slc1a4O35874 532 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Gas2l3Q3UWW6 683 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Slc38a10Q5I012 1090 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Rcan1Q9JHG6 198 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Nek3Q9R0A5 511 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Dhx8A2A4P0 1244 aaKnown RBP21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Jakmip2D3YXK0 820 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Foxp1P58462 705 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Arhgef16Q3U5C8 713 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Pla2g4fQ50L41 855 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Slitrk3Q810B9 980 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Sirt2Q8VDQ8 389 aa21.62■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms