RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ifit2Q64112 472 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Iws1Q8C1D8 766 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Bmp2kQ91Z96 1138 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc155Q80VJ8 648 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Tshz3Q8CGV9 1081 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Emilin2Q8K482 1074 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Lmbr1lQ9D1E5 489 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Zbtb21E9Q444 1094 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gsta4P24472 222 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Sox13Q04891 613 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 TchpQ3TVW5 497 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gm5168Q4KL04 211 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Nucks1Q80XU3 234 aaKnown RBP10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pde5aQ8CG03 865 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Sde2Q8K1J5 448 aaKnown RBP10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Klhl20Q8VCK5 604 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ankrd49Q8VE42 238 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Usp11Q99K46 921 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ak2Q9WTP6 239 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gipc1Q9Z0G0 333 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Snapc4Q8BP86 1333 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Duxf3A0A0N4SV92 674 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Utp18Q5SSI6 552 aaKnown RBP10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Tmx3Q8BXZ1 456 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Fbxo3Q9DC63 480 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Stk36Q69ZM6 1316 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rapgef6Q5NCJ1 1609 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Becn2P0DM65 447 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Snrpa1P57784 255 aaKnown RBP10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Leo1Q5XJE5 667 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Mybpc2Q5XKE0 1136 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ankrd13dQ6PD24 605 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc82Q6PG04 518 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Znf526Q8BI66 675 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 PpanQ91YU8 470 aaKnown RBP10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Armc9Q9D2I5 817 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Agbl1Q09M05 972 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Wdr93Q402B2 695 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc25Q78PG9 208 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Thap12Q9CUX1 758 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Catsper2A2ARP9 588 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Speer2E9Q9U2 264 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Q3TYL0 343 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Glg1Q61543 1175 aaKnown RBP10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Trim37Q6PCX9 961 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 IqcdQ9D3V1 458 aa10.24□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Parp1P11103 1013 aaKnown RBP10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rbm12b2Q66JV4 834 aaKnown RBP10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Camsap3Q80VC9 1252 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Trim68Q8K243 485 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ribc1Q9D0B8 379 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pik3ap1Q9EQ32 811 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Angptl3Q9R182 455 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gm3409A0A0G2JE67 319 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc13D3YV10 709 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 EnahQ03173 802 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 RilpQ5ND29 369 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 SpopQ6ZWS8 374 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ankrd24Q80VM7 985 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ndufa8Q9DCJ5 172 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Hs6st3Q9QYK4 470 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 HnrnpcQ9Z204 313 aaKnown RBP10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 AI481877A2ALV5 1481 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 GnpatP98192 678 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Clcn1Q64347 994 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pdzrn3Q69ZS0 1063 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Csrnp2Q8BGQ2 534 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc7Q9D541 371 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Prl3d3A0A0M6L0J6 224 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ier5O89113 308 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Eef1dP57776 281 aaKnown RBP10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Stxbp3Q60770 592 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Trim60Q8VI40 466 aa10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pdcd6ipQ9WU78 869 aaKnown RBP10.23□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Capza3P70190 299 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Atp2a3Q64518 1038 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pnpla2Q8BJ56 486 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rab44Q8CB87 725 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Fam228aQ8CDW1 299 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Osbpl5Q9ER64 874 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Homer2Q9QWW1 354 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 SynmQ70IV5 1561 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Lrrc74aA0A1Y7VMD6 494 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Taf4E9QAP7 1042 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Plcb3P51432 1234 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 YwhaeP62259 255 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rnf40Q3U319 1001 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 RpgrQ9R0X5 1001 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Kcnh3Q9WVJ0 1095 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Eef2P58252 858 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 PsdQ5DTT2 1024 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Anp32cQ64G17 123 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Dph6Q9CQ28 267 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Stat2Q9WVL2 923 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Spocd1B1ASB6 936 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gm6583E9Q8Z1 469 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Nedd9O35177 833 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Vamp4O70480 141 aa10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rbm19Q8R3C6 952 aaKnown RBP10.22□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Efcab2Q9CQ46 164 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms