RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MGLLQ99685 303 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 COA4Q9NYJ1 87 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
RPS28-204ENST00000602140 NKX1-2Q9UD57 310 aaPredicted RBP10.04□□□□□ -0.8
RPS28-204ENST00000602140 ZNF230Q9UIE0 474 aaPredicted RBP10.04□□□□□ -0.8
RPS28-204ENST00000602140 ADAM30Q9UKF2 790 aa10.04□□□□□ -0.8
RPS28-204ENST00000602140 RBM7Q9Y580 266 aaKnown RBP10.04□□□□□ -0.8
RPS28-204ENST00000602140 MSGN1A6NI15 193 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 ANKRD65E5RJM6 399 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 H0Y980 276 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 BRI3O95415 125 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 GNB3P16520 340 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
RPS28-204ENST00000602140 DYRK1AQ13627 763 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 TATDN3Q17R31 274 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 RTL8BQ17RB0 113 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 MRGPRG-AS1Q2M3A8 158 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 ISOC1Q96CN7 298 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 USMG5Q96IX5 58 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 GINS4Q9BRT9 223 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 ACOT13Q9NPJ3 140 aa10.03□□□□□ -0.8
RPS28-204ENST00000602140 A0A075B6Q4 140 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 LCE6AA0A183 80 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 RBMXL2O75526 392 aaKnown RBP10.02□□□□□ -0.81
RPS28-204ENST00000602140 DIRAS3O95661 229 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 RRASP10301 218 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 GADD45AP24522 165 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 MAP2K4P45985 399 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 OR10A3P58181 314 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 TNXAQ16473 311 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 VMA21Q3ZAQ7 101 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 PRSS48Q7RTY5 328 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 NRG4Q8WWG1 115 aa10.02□□□□□ -0.81
RPS28-204ENST00000602140 LINC00473A8K010 186 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 RAB27BO00194 218 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 MFNGO00587 321 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 CRYZL1O95825 349 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 CSN3P07498 182 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 OR9G9P0C7N8 305 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 HIST1H1DP16402 221 aaKnown RBP10.01□□□□□ -0.81
RPS28-204ENST00000602140 CRHBPP24387 322 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 DUTP33316 252 aaKnown RBP10.01□□□□□ -0.81
RPS28-204ENST00000602140 UBE2KP61086 200 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 PRSS8Q16651 343 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 HAGHQ16775 308 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 RPEL1Q2QD12 228 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 LCN12Q6JVE5 192 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 IDO2Q6ZQW0 420 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 GTSCR1Q86UQ5 136 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 TEX45Q8NA69 505 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 ADAD2Q8NCV1 583 aaKnown RBP10.01□□□□□ -0.81
RPS28-204ENST00000602140 SRSF12Q8WXF0 261 aaKnown RBP10.01□□□□□ -0.81
RPS28-204ENST00000602140 ACOT12Q8WYK0 555 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 DDB2Q92466 427 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 SNAPC3Q92966 411 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 ADTRPQ96IZ2 230 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 THAP7Q9BT49 309 aaPredicted RBP10.01□□□□□ -0.81
RPS28-204ENST00000602140 TUBA4BQ9H853 241 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 SIGLEC8Q9NYZ4 499 aa10.01□□□□□ -0.81
RPS28-204ENST00000602140 RYR2Q92736 4967 aa10□□□□□ -0.81
RPS28-204ENST00000602140 A0A0B4J203 849 aa10□□□□□ -0.81
RPS28-204ENST00000602140 SHISA3A0PJX4 238 aa10□□□□□ -0.81
RPS28-204ENST00000602140 IZUMO1RA6ND01 250 aa10□□□□□ -0.81
RPS28-204ENST00000602140 IFITM5A6NNB3 132 aa10□□□□□ -0.81
RPS28-204ENST00000602140 PDCD5O14737 125 aa10□□□□□ -0.81
RPS28-204ENST00000602140 MPPED1O15442 326 aa10□□□□□ -0.81
RPS28-204ENST00000602140 PRH1P02810 166 aa10□□□□□ -0.81
RPS28-204ENST00000602140 RAB6AP20340 208 aa10□□□□□ -0.81
RPS28-204ENST00000602140 TALDO1P37837 337 aa10□□□□□ -0.81
RPS28-204ENST00000602140 RHOGP84095 191 aa10□□□□□ -0.81
RPS28-204ENST00000602140 ARFRP1Q13795 201 aa10□□□□□ -0.81
RPS28-204ENST00000602140 SSX1Q16384 188 aa10□□□□□ -0.81
RPS28-204ENST00000602140 H1FOOQ8IZA3 346 aaPredicted RBP10□□□□□ -0.81
RPS28-204ENST00000602140 Q8N402 240 aa10□□□□□ -0.81
RPS28-204ENST00000602140 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
RPS28-204ENST00000602140 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 IGKV1D-8A0A087WSZ0 117 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 TRAV1-2A0A0B4J238 106 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 METTL21EPA6NDL7 271 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 J3QRK9 145 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 OR2A4O95047 310 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 MYL9P24844 172 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 OSR1Q8TAX0 266 aaPredicted RBP9.99□□□□□ -0.81
RPS28-204ENST00000602140 CENPOQ9BU64 300 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 ZNF430Q9H8G1 570 aaPredicted RBP9.99□□□□□ -0.81
RPS28-204ENST00000602140 PEMTQ9UBM1 199 aa9.99□□□□□ -0.81
RPS28-204ENST00000602140 ELF5Q9UKW6 265 aaPredicted RBP9.99□□□□□ -0.81
RPS28-204ENST00000602140 ERICH4A6NGS2 130 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 BMPR1BO00238 502 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 ACTL6BO94805 426 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 IFNA6P05013 189 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 SAA1P0DJI8 122 aaPredicted RBP9.98□□□□□ -0.81
RPS28-204ENST00000602140 RAB3BP20337 219 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 MECP2P51608 486 aaKnown RBP9.98□□□□□ -0.81
RPS28-204ENST00000602140 ZNF45Q02386 682 aa9.98□□□□□ -0.81
RPS28-204ENST00000602140 ATP5G2Q06055 141 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms