RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 OR2K2Q8NGT1 345 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 TMEM203Q969S6 136 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 FAM3DQ96BQ1 224 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 HARBI1Q96MB7 349 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 OR2D2Q9H210 308 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 DUSP21Q9H596 190 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 PLGRKTQ9HBL7 147 aa8.89□□□□□ -0.99
CLIP3-204ENST00000590559 TMEM272A0A1B0GTI8 110 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 LINC00473A8K010 186 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 ZNF785A8K8V0 405 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 PTGES3LE9PB15 166 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 BMPR1BO00238 502 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 FCGR3AP08637 254 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 GSTT2P0CG29 244 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 GSTT2BP0CG30 244 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
CLIP3-204ENST00000590559 UBE2KP61086 200 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 RPS25P62851 125 aaKnown RBP8.88□□□□□ -0.99
CLIP3-204ENST00000590559 ZNF45Q02386 682 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 TRAM1Q15629 374 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 RAB11BQ15907 218 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 Q6ZS49 121 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 UFD1Q92890 307 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 HIPK2Q9H2X6 1198 aa8.88□□□□□ -0.99
CLIP3-204ENST00000590559 ZNF230Q9UIE0 474 aaPredicted RBP8.88□□□□□ -0.99
CLIP3-204ENST00000590559 SHISA3A0PJX4 238 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 MSGN1A6NI15 193 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 RAB27BO00194 218 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 MFNGO00587 321 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 BET1O15155 118 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 SHOXO15266 292 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 DENRO43583 198 aaKnown RBP8.87□□□□□ -0.99
CLIP3-204ENST00000590559 ARL6IP5O75915 188 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 OR9G9P0C7N8 305 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 RRASP10301 218 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 FABP5Q01469 135 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 PRSS8Q16651 343 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 GTSCR1Q86UQ5 136 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 LAX1Q8IWV1 398 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 SNAPC3Q92966 411 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 AKIP1Q9NQ31 210 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 COA4Q9NYJ1 87 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 NKX1-2Q9UD57 310 aaPredicted RBP8.87□□□□□ -0.99
CLIP3-204ENST00000590559 RAB22AQ9UL26 194 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 V9GY05 133 aa8.87□□□□□ -0.99
CLIP3-204ENST00000590559 IGKV1D-8A0A087WSZ0 117 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RBMY1BA6NDE4 496 aaKnown RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RBMY1EA6NEQ0 496 aaKnown RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 AIREO43918 545 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 IFNA6P05013 189 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RBMY1DP0C7P1 496 aaKnown RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 APELAP0DMC3 54 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 PSMA1P25786 263 aaKnown RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 MLLT11Q13015 90 aaPredicted RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 TATDN3Q17R31 274 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RTL8BQ17RB0 113 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RPEL1Q2QD12 228 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 KLK9Q2XQG4 91 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 FAM223AQ8IWN6 122 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 H1FOOQ8IZA3 346 aaPredicted RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 TTC9CQ8N5M4 171 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 OSR1Q8TAX0 266 aaPredicted RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 SRSF12Q8WXF0 261 aaKnown RBP8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RAB3CQ96E17 227 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 TUBA4BQ9H853 241 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 RETNQ9HD89 108 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 ZC4H2Q9NQZ6 224 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 KLK9Q9UKQ9 250 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 CEPT1Q9Y6K0 416 aa8.86□□□□□ -0.99
CLIP3-204ENST00000590559 PRH1P02810 166 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 HIST1H1DP16402 221 aaKnown RBP8.85□□□□□ -0.99
CLIP3-204ENST00000590559 CALRP27797 417 aaKnown RBP8.85□□□□□ -0.99
CLIP3-204ENST00000590559 RHOGP84095 191 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 TNXAQ16473 311 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 DEFB114Q30KQ6 69 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 CD300EQ496F6 205 aaPredicted RBP8.85□□□□□ -0.99
CLIP3-204ENST00000590559 IDO2Q6ZQW0 420 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 OR10R2Q8NGX6 335 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 MAFIPQ8WZ33 124 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 ADTRPQ96IZ2 230 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 ZNF430Q9H8G1 570 aaPredicted RBP8.85□□□□□ -0.99
CLIP3-204ENST00000590559 SCN3BQ9NY72 215 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 PEMTQ9UBM1 199 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 DNAH10Q8IVF4 4471 aa8.85□□□□□ -0.99
CLIP3-204ENST00000590559 TRAV1-2A0A0B4J238 106 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 CRYZL1O95825 349 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 IGLV2-14P01704 120 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 CD7P09564 240 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 SAA1P0DJI8 122 aaPredicted RBP8.84□□□□□ -0.99
CLIP3-204ENST00000590559 GNB3P16520 340 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 RAB6AP20340 208 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 EDN2P20800 178 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 RANBP1P43487 201 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 PSMD7P51665 324 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 CD81P60033 236 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 CBX3Q13185 183 aa8.84□□□□□ -0.99
CLIP3-204ENST00000590559 EXOSC2Q13868 293 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms