RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 PECRQ9BY49 303 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 ZNF355PQ9NSJ1 428 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 RAB22AQ9UL26 194 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 SLC25A17O43808 307 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 CRYGBP07316 175 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 CLDN12P56749 244 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 CBX3Q13185 183 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 OR5T1Q8NG75 326 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 OR9G4Q8NGQ1 327 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 GRPEL2Q8TAA5 225 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 ISOC1Q96CN7 298 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 ARHGAP5-AS1Q96IT6 56 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 KCNK15Q9H427 330 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 SLC35D1Q9NTN3 355 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 RDH8Q9NYR8 311 aa11.48□□□□□ -0.57
VAPA-209ENST00000585042 DNAH7Q8WXX0 4024 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 IGKV1-6A0A0C4DH72 117 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 LOC100506127A0A0U1RQW1 187 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 LCE6AA0A183 80 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 METTL21EPA6NDL7 271 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 NOTOA8MTQ0 251 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 M0R1X1 148 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 IGLV2-23P01705 113 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 RRASP10301 218 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 MRPS15P82914 257 aaKnown RBP11.47□□□□□ -0.57
VAPA-209ENST00000585042 ZNF343Q6P1L6 599 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 RSRP1Q9BUV0 290 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 TINAGL1Q9GZM7 467 aaPredicted RBP11.47□□□□□ -0.57
VAPA-209ENST00000585042 OR51E2Q9H255 320 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
VAPA-209ENST00000585042 PEF1Q9UBV8 284 aaKnown RBP11.47□□□□□ -0.57
VAPA-209ENST00000585042 RAB6AP20340 208 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 GADD45AP24522 165 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 OR10A3P58181 314 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 LINC00205P59089 165 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.57
VAPA-209ENST00000585042 TMEM177Q53S58 311 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 TEX45Q8NA69 505 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 OR10J5Q8NHC4 309 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 SPATA25Q9BR10 227 aa11.46□□□□□ -0.57
VAPA-209ENST00000585042 HUWE1Q7Z6Z7 4374 aaKnown RBP11.46□□□□□ -0.58
VAPA-209ENST00000585042 TMEM272A0A1B0GTI8 110 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 ANKRD34BA5PLL1 514 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 FABP7O15540 132 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 AIREO43918 545 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 PJVKQ0ZLH3 352 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 ARL6IP1Q15041 203 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 PLAC9Q5JTB6 97 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 LCN12Q6JVE5 192 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 GTSCR1Q86UQ5 136 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 OR2K2Q8NGT1 345 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 SNAPC3Q92966 411 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 ADTRPQ96IZ2 230 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 CABLES2Q9BTV7 478 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 SDHAF2Q9NX18 166 aa11.45□□□□□ -0.58
VAPA-209ENST00000585042 TRBV6-7A0A0A0MS04 114 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 SHISA3A0PJX4 238 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 SHOXO15266 292 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 TMEM127O75204 238 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 SCGNO76038 276 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 OR2A4O95047 310 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 IFNA6P05013 189 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 CD3GP09693 182 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 SNRPBP14678 240 aaKnown RBP11.44□□□□□ -0.58
VAPA-209ENST00000585042 SDC2P34741 201 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 MECP2P51608 486 aaKnown RBP11.44□□□□□ -0.58
VAPA-209ENST00000585042 SYNJ2BPP57105 145 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 CROCCP3Q8IVE0 287 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 Q8N402 240 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 RAB3CQ96E17 227 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 HARBI1Q96MB7 349 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 THAP7Q9BT49 309 aaPredicted RBP11.44□□□□□ -0.58
VAPA-209ENST00000585042 OR2D2Q9H210 308 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 DAPK2Q9UIK4 370 aa11.44□□□□□ -0.58
VAPA-209ENST00000585042 CSN3P07498 182 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 SCAND1P57086 179 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 HAGHQ16775 308 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 RPEL1Q2QD12 228 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 FAM209BQ5JX69 171 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 SFXN4Q6P4A7 337 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 BVESQ8NE79 360 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 PEMTQ9UBM1 199 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 KCNK7Q9Y2U2 307 aa11.43□□□□□ -0.58
VAPA-209ENST00000585042 A0A0B4J203 849 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 MSGN1A6NI15 193 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 FAM223BA6NKX1 122 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 SRRM4A7MD48 611 aaKnown RBP11.42□□□□□ -0.58
VAPA-209ENST00000585042 BET1O15155 118 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 FCGR3AP08637 254 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 OR9G9P0C7N8 305 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 UBE2KP61086 200 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 MXD1Q05195 221 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 DYRK1AQ13627 763 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 VMA21Q3ZAQ7 101 aa11.42□□□□□ -0.58
VAPA-209ENST00000585042 IGSF11Q5DX21 431 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms