RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 IDO2Q6ZQW0 420 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ACOT12Q8WYK0 555 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RCHY1Q96PM5 261 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ATG5Q9H1Y0 275 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ZMAT4Q9H898 229 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RANGRFQ9HD47 186 aaPredicted RBP7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 STUB1Q9UNE7 303 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
CDK5RAP3-211ENST00000578996 HUWE1Q7Z6Z7 4374 aaKnown RBP7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TRBV6-7A0A0A0MS04 114 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TRAV1-2A0A0B4J238 106 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 METTL21EPA6NDL7 271 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 H3BUA1 57 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RAB27BO00194 218 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CRYZL1O95825 349 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RAB6AP20340 208 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ZP3P21754 424 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SSBP2P81877 361 aaPredicted RBP7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 VMA21Q3ZAQ7 101 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 C5orf30Q96GV9 206 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DCUN1D5Q9BTE7 237 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ST6GALNAC5Q9BVH7 336 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 BATF3Q9NR55 127 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 NDUFB11Q9NX14 153 aa7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ELF5Q9UKW6 265 aaPredicted RBP7.07□□□□□ -1.28
CDK5RAP3-211ENST00000578996 MSGN1A6NI15 193 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SRRM4A7MD48 611 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 C3orf84H3BNL1 204 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CRYGBP07316 175 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 IGHV4-30-4P0DP06 118 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RRASP10301 218 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 PSMB9P28065 219 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SYNJ2BPP57105 145 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TAGLNQ01995 201 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RPEL1Q2QD12 228 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TMEM177Q53S58 311 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 OR2B11Q5JQS5 317 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SGPP2Q8IWX5 399 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 OR9G4Q8NGQ1 327 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 MUC7Q8TAX7 377 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ADTRPQ96IZ2 230 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TMEM68Q96MH6 324 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TINAGL1Q9GZM7 467 aaPredicted RBP7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 PALMDQ9NP74 551 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 PEF1Q9UBV8 284 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ADAM30Q9UKF2 790 aa7.06□□□□□ -1.28
CDK5RAP3-211ENST00000578996 IGKV1D-8A0A087WSZ0 117 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TRDV1A0A1B0GX56 115 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 LINC00473A8K010 186 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 FCGR3BO75015 233 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TUSC2O75896 110 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ACTL6BO94805 426 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 IGLV1-51P01701 117 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TRBV12-3P01733 135 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 PRH1P02810 166 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 AADACP22760 399 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 NFYAP23511 347 aaPredicted RBP7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DUTP33316 252 aaKnown RBP7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 UBE2KP61086 200 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ARL6IP1Q15041 203 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TATDN3Q17R31 274 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CDNFQ49AH0 187 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 KCTD9Q7L273 389 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 NR2C2APQ86WQ0 139 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ZNF645Q8N7E2 425 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SRSF12Q8WXF0 261 aaKnown RBP7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CENPOQ9BU64 300 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DAPK2Q9UIK4 370 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TENM3Q9P273 2699 aa7.05□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TMEM235A6NFC5 223 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 H0Y980 276 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CREBL2O60519 120 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DIRAS3O95661 229 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SAA1P0DJI8 122 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CD36P16671 472 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DTYMKP23919 212 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 GNG2P59768 71 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DYRK1AQ13627 763 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 KLF5Q13887 457 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 PRSS8Q16651 343 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 C10orf55Q5SWW7 151 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TEX45Q8NA69 505 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 OSR1Q8TAX0 266 aaPredicted RBP7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 NUDCD2Q8WVJ2 157 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DDB2Q92466 427 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 USMG5Q96IX5 58 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TXNL4BQ9NX01 149 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SPATA2Q9UM82 520 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 MRPS7Q9Y2R9 242 aaKnown RBP7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 PRELID3BQ9Y3B1 194 aa7.04□□□□□ -1.28
CDK5RAP3-211ENST00000578996 NOTOA8MTQ0 251 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RBMXL2O75526 392 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CTXN2P0C2S0 81 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 LYL1P12980 280 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 GABARAPL2P60520 117 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 RHOGP84095 191 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ATP5G2Q06055 141 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 EXOSC2Q13868 293 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms