RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 RAB6AP20340 208 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 CRHBPP24387 322 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 UBE2KP61086 200 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 ARL6IP1Q15041 203 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 VMA21Q3ZAQ7 101 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 CCDC90BQ9GZT6 254 aa11.45□□□□□ -0.58
RNF40-209ENST00000566703 RBM7Q9Y580 266 aaKnown RBP11.45□□□□□ -0.58
RNF40-209ENST00000566703 METTL21EPA6NDL7 271 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 MSGN1A6NI15 193 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 RAB27BO00194 218 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 AQP4P55087 323 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 HES5Q5TA89 166 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
RNF40-209ENST00000566703 DDB2Q92466 427 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 SNAPC3Q92966 411 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 PALMDQ9NP74 551 aa11.44□□□□□ -0.58
RNF40-209ENST00000566703 NKX1-2Q9UD57 310 aaPredicted RBP11.44□□□□□ -0.58
RNF40-209ENST00000566703 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 OR2A4O95047 310 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 CSN3P07498 182 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 HIST1H1DP16402 221 aaKnown RBP11.43□□□□□ -0.58
RNF40-209ENST00000566703 DUTP33316 252 aaKnown RBP11.43□□□□□ -0.58
RNF40-209ENST00000566703 TALDO1P37837 337 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 MECP2P51608 486 aaKnown RBP11.43□□□□□ -0.58
RNF40-209ENST00000566703 SYNJ2BPP57105 145 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 PLA2G7Q13093 441 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 DYRK1AQ13627 763 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 PRSS8Q16651 343 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 MRGPRG-AS1Q2M3A8 158 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 H1FOOQ8IZA3 346 aaPredicted RBP11.43□□□□□ -0.58
RNF40-209ENST00000566703 Q8N402 240 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 ADAD2Q8NCV1 583 aaKnown RBP11.43□□□□□ -0.58
RNF40-209ENST00000566703 OR2K2Q8NGT1 345 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 GINS4Q9BRT9 223 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 COA4Q9NYJ1 87 aa11.43□□□□□ -0.58
RNF40-209ENST00000566703 RYR3Q15413 4870 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 AIREO43918 545 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 CREBL2O60519 120 aaPredicted RBP11.42□□□□□ -0.58
RNF40-209ENST00000566703 CTXN2P0C2S0 81 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 GNB3P16520 340 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 GALP22466 123 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 DTYMKP23919 212 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 MAP2K4P45985 399 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
RNF40-209ENST00000566703 RPEL1Q2QD12 228 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 LCN12Q6JVE5 192 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 ZNF367Q7RTV3 350 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 NRG4Q8WWG1 115 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 ISOC1Q96CN7 298 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 C5orf30Q96GV9 206 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 PHB2Q99623 299 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 SPATA25Q9BR10 227 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 THAP7Q9BT49 309 aaPredicted RBP11.42□□□□□ -0.58
RNF40-209ENST00000566703 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
RNF40-209ENST00000566703 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
RNF40-209ENST00000566703 A0A0B4J203 849 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 TRDV1A0A1B0GX56 115 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 SLC22A5O76082 557 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 MYL9P24844 172 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 ARFRP1Q13795 201 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 SSX1Q16384 188 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 TNXAQ16473 311 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 SRSF12Q8WXF0 261 aaKnown RBP11.41□□□□□ -0.58
RNF40-209ENST00000566703 SPIN2AQ99865 258 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 SPIN2BQ9BPZ2 258 aa11.41□□□□□ -0.58
RNF40-209ENST00000566703 TRBV9A0A0B4J1U6 114 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 LCE6AA0A183 80 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 ACTL6BO94805 426 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 CRYZL1O95825 349 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 TRBV12-3P01733 135 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 IFNA6P05013 189 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 RAB3BP20337 219 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 OR10A3P58181 314 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 CDK10Q15131 360 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 HAGHQ16775 308 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 MMD2Q8IY49 270 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 TUBA4BQ9H853 241 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 BLOC1S6Q9UL45 172 aa11.4□□□□□ -0.58
RNF40-209ENST00000566703 SHISA3A0PJX4 238 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 LINC00473A8K010 186 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 MPPED1O15442 326 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 RHOGP84095 191 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 ATP5G2Q06055 141 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 SLC25A42Q86VD7 318 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 LAX1Q8IWV1 398 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 ZNF645Q8N7E2 425 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 MAFIPQ8WZ33 124 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 ATG5Q9H1Y0 275 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 DCSTAMPQ9H295 470 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 VCX3BQ9H321 246 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 AKIP1Q9NQ31 210 aa11.39□□□□□ -0.59
RNF40-209ENST00000566703 NDUFB11Q9NX14 153 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms