RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PSMB3P49720 205 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 UBE2KP61086 200 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 TMEM155Q4W5P6 130 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 RNF133Q8WVZ7 376 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 MRAP2Q96G30 205 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 NXT1Q9UKK6 140 aaKnown RBP0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 COL7A1Q02388 2944 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 GAPVD1Q14C86 1478 aa0.61□□□□□ -2.31
SCARNA1-201ENST00000517138 COL4A6Q14031 1691 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 IGKV3-7A0A075B6H7 116 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 FABP7O15540 132 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 GPX2P18283 190 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 NPPCP23582 126 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 GADD45AP24522 165 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 UGT2B10P36537 528 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 ACTR1BP42025 376 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 OR10A3P58181 314 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 LINC00313P59037 77 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 CDRT4Q8N9R6 151 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 STK38LQ9Y2H1 464 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 SNX24Q9Y343 169 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 DIP2AQ14689 1571 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 CUBNO60494 3623 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 RALGAPBQ86X10 1494 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 CASZ1Q86V15 1759 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 PTPRSQ13332 1948 aa0.6□□□□□ -2.31
SCARNA1-201ENST00000517138 HIVEP1P15822 2718 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 ATMQ13315 3056 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 GRIFINA4D1Z8 144 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 TPM2P07951 284 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 PTNP21246 168 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 XCL1P47992 114 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 NNATQ16517 81 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 LHFPL1Q86WI0 220 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 CATSPER2Q96P56 530 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 MIEN1Q9BRT3 115 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 RABL2AQ9UBK7 228 aaPredicted RBP0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 DNAJC12Q9UKB3 198 aa0.59□□□□□ -2.31
SCARNA1-201ENST00000517138 ZCCHC11Q5TAX3 1644 aaKnown RBP0.59□□□□□ -2.32
SCARNA1-201ENST00000517138 MED12LQ86YW9 2145 aa0.59□□□□□ -2.32
SCARNA1-201ENST00000517138 CLUHO75153 1309 aa0.59□□□□□ -2.32
SCARNA1-201ENST00000517138 ABCB11O95342 1321 aa0.59□□□□□ -2.32
SCARNA1-201ENST00000517138 NBASA2RRP1 2371 aa0.59□□□□□ -2.32
SCARNA1-201ENST00000517138 NUP188Q5SRE5 1749 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 ABCA3Q99758 1704 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 CACNA1EQ15878 2313 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 MUC4Q99102 2169 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 OR11H12B2RN74 326 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 GPR171O14626 319 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 HMMRO75330 724 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 ATF1P18846 271 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 CDK2P24941 298 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 TSPAN5P62079 268 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 VSNL1P62760 191 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 HOXC5Q00444 222 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 PLCXD2Q0VAA5 305 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 HSP90B2PQ58FF3 399 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 PABPC1L2AQ5JQF8 200 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 TMEM31Q5JXX7 168 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 SSX6Q7RTT6 188 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 PDCL2Q8N4E4 241 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 OR2Y1Q8NGV0 311 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 OR11H2Q8NH07 326 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 OR5J2Q8NH18 312 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 RBMX2Q9Y388 322 aaKnown RBP0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 COL1A1P02452 1464 aaPredicted RBP0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 KIAA0100Q14667 2235 aaKnown RBP0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 SLIT1O75093 1534 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 ZMYM4Q5VZL5 1548 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 DCAF1Q9Y4B6 1507 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 DCHS2Q6V1P9 2916 aa0.58□□□□□ -2.32
SCARNA1-201ENST00000517138 PRKDCP78527 4128 aaKnown RBP0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 GLI3P10071 1580 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 KMT2AQ03164 3969 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 CADP27708 2225 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 TRIOO75962 3097 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 BPGMP07738 259 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 DAPP51397 102 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 OR10J3Q5JRS4 329 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 AHSA2Q719I0 299 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 SLC35E3Q7Z769 313 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 CNEP1R1Q8N9A8 125 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 C15orf53Q8NAA6 179 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 ACBD4Q8NC06 268 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 LRRC39Q96DD0 335 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 GOLPH3Q9H4A6 298 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 CHD7Q9P2D1 2997 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 HHLA2Q9UM44 414 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 HHLA3Q9XRX5 114 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 KLK5Q9Y337 293 aaPredicted RBP0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 ADGRG4Q8IZF6 3080 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 PAPPA2Q9BXP8 1791 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 UNC13BO14795 1591 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 ABCA4P78363 2273 aa0.57□□□□□ -2.32
SCARNA1-201ENST00000517138 ADCY10Q96PN6 1610 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 RNF17Q9BXT8 1623 aaKnown RBP0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 NCOA1Q15788 1441 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 RREB1Q92766 1687 aa0.56□□□□□ -2.32
SCARNA1-201ENST00000517138 TNS1Q9HBL0 1735 aaKnown RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms