RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 LPAR6P43657 344 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 HAAOP46952 286 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 NPBWR2P48146 333 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 CAMLGP49069 296 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TAS2R30P59541 319 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 FXYD4P59646 89 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 RAB2AP61019 212 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 CX3CL1P78423 397 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 HLA-DRB3P79483 266 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 EWSR1Q01844 656 aaKnown RBP eCLIP3.08□□□□□ -1.92
CAST-242ENST00000515063 PLGLB1Q02325 96 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SLC10A1Q14973 349 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 RHEBQ15382 184 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 OR1C1Q15619 314 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TSC22D1Q15714 1073 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 GABRA6Q16445 453 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 GUK1Q16774 197 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 FAM74A3Q4VXF1 159 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 C14orf177Q52M58 125 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 NMSQ5H8A3 153 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 AVPI1Q5T686 147 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 FBXW9Q5XUX1 488 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TCEAL6Q6IPX3 200 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TEX38Q6PEX7 206 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 LYZL2Q7Z4W2 148 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 ZNF695Q8IW36 515 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 FAM219AQ8IW50 185 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TUSC5Q8IXB3 177 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 H1FOOQ8IZA3 346 aaPredicted RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 ARL6IP6Q8N6S5 226 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TCTEX1D1Q8N7M0 179 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SLC35G3Q8N808 338 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TMEM178AQ8NBL3 297 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 MDS2Q8NDY4 140 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 BHLHE23Q8NDY6 225 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 OR10G4Q8NGN3 311 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 OR1K1Q8NGR3 316 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 MRPL30Q8TCC3 161 aaKnown RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 ABHD3Q8WU67 409 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 HPSE2Q8WWQ2 592 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 TMEM190Q8WZ59 177 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 BCL2L2Q92843 193 aaPredicted RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 MALSU1Q96EH3 234 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 GUCD1Q96NT3 240 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SIGLEC12Q96PQ1 595 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 RAB40CQ96S21 281 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 RTL8AQ9BWD3 113 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SCRT1Q9BWW7 348 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 PRRG4Q9BZD6 226 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 GFRA4Q9GZZ7 299 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 COA4Q9NYJ1 87 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 POLDIP2Q9Y2S7 368 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 WIPI2Q9Y4P8 454 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SHANK1Q9Y566 2161 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 SDK1Q7Z5N4 2213 aa3.08□□□□□ -1.92
CAST-242ENST00000515063 RANBP2P49792 3224 aaKnown RBP3.08□□□□□ -1.92
CAST-242ENST00000515063 RTTNQ86VV8 2226 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 PIEZO1Q92508 2521 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 A0A087WWC5 75 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 TRAV1-1A0A0B4J248 108 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 A0A1W2PN81 502 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 C5orf49A4QMS7 147 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 NKX2-6A6NCS4 301 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 COLCA2A8K830 154 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 RNF212BA8MTL3 300 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 IQCF6A8MYZ5 107 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 TGOLN2O43493 480 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 SOX15O60248 233 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 PGLYRP1O75594 196 aaPredicted RBP3.07□□□□□ -1.92
CAST-242ENST00000515063 WISP2O76076 250 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 PDGFBP01127 241 aaPredicted RBP3.07□□□□□ -1.92
CAST-242ENST00000515063 IGHG3P01860 377 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 MT-ND4LP03901 98 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 SFTA3P0C7M3 94 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 SP9P0CG40 484 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 IGHV4-38-2P0DP08 117 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 CD59P13987 128 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 PRKACAP17612 351 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 RCC1P18754 421 aaPredicted RBP3.07□□□□□ -1.92
CAST-242ENST00000515063 ITGA3P26006 1051 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 CD80P33681 288 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 CHRNA7P36544 502 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 TAGLN2P37802 199 aaKnown RBP3.07□□□□□ -1.92
CAST-242ENST00000515063 MAGEA5P43359 124 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 NPBWR1P48145 328 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 ASCL1P50553 236 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 RAB13P51153 203 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 GPM6AP51674 278 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 ARHGDIBP52566 201 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 RAB5BP61020 215 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 RPL23AP62750 156 aaKnown RBP3.07□□□□□ -1.92
CAST-242ENST00000515063 S100A12P80511 92 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 SERF2P84101 59 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 PAX5Q02548 391 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 TGFBR3Q03167 851 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 CLINT1Q14677 625 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 ZNF146Q15072 292 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 TBC1D28Q2M2D7 210 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 SP6Q3SY56 376 aa3.07□□□□□ -1.92
CAST-242ENST00000515063 PHLDA2Q53GA4 152 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms