RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SRRM4A7MD48 611 aaKnown RBP16.83■□□□□ 0.28
HDDC3-203ENST00000494993 RGS10O43665 173 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 DIRAS3O95661 229 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 DYRK1AQ13627 763 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 RTL8BQ17RB0 113 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 MRGPRG-AS1Q2M3A8 158 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 HES5Q5TA89 166 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 RAB3CQ96E17 227 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 USMG5Q96IX5 58 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 SPATA25Q9BR10 227 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 COA4Q9NYJ1 87 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 ADAM30Q9UKF2 790 aa16.83■□□□□ 0.28
HDDC3-203ENST00000494993 DNAH1Q9P2D7 4330 aa16.82■□□□□ 0.28
HDDC3-203ENST00000494993 TRBV12-3P01733 135 aa16.82■□□□□ 0.28
HDDC3-203ENST00000494993 PSMD7P51665 324 aa16.82■□□□□ 0.28
HDDC3-203ENST00000494993 PHB2Q99623 299 aa16.82■□□□□ 0.28
HDDC3-203ENST00000494993 THAP7Q9BT49 309 aaPredicted RBP16.82■□□□□ 0.28
HDDC3-203ENST00000494993 CSN3P07498 182 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 APELAP0DMC3 54 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 RRASP10301 218 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 AQP4P55087 323 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 TATDN3Q17R31 274 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 RPEL1Q2QD12 228 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 MAFIPQ8WZ33 124 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 MGLLQ99685 303 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 ACOT13Q9NPJ3 140 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 SIGLEC8Q9NYZ4 499 aa16.81■□□□□ 0.28
HDDC3-203ENST00000494993 RBM7Q9Y580 266 aaKnown RBP16.81■□□□□ 0.28
HDDC3-203ENST00000494993 MSGN1A6NI15 193 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 MFNGO00587 321 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 HAGHQ16775 308 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 VMA21Q3ZAQ7 101 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 LCN12Q6JVE5 192 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 GTSCR1Q86UQ5 136 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 Q8N402 240 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 TEX45Q8NA69 505 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 ADAD2Q8NCV1 583 aaKnown RBP16.8■□□□□ 0.28
HDDC3-203ENST00000494993 OR10R2Q8NGX6 335 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 DDB2Q92466 427 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 CCDC90BQ9GZT6 254 aa16.8■□□□□ 0.28
HDDC3-203ENST00000494993 ZNF230Q9UIE0 474 aaPredicted RBP16.8■□□□□ 0.28
HDDC3-203ENST00000494993 RBMXL2O75526 392 aaKnown RBP16.79■□□□□ 0.28
HDDC3-203ENST00000494993 OR9G9P0C7N8 305 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 GNB3P16520 340 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 GADD45AP24522 165 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 DUTP33316 252 aaKnown RBP16.79■□□□□ 0.28
HDDC3-203ENST00000494993 UBE2KP61086 200 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 TNXAQ16473 311 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 PRSS8Q16651 343 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 ADTRPQ96IZ2 230 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 GINS4Q9BRT9 223 aa16.79■□□□□ 0.28
HDDC3-203ENST00000494993 NKX1-2Q9UD57 310 aaPredicted RBP16.79■□□□□ 0.28
HDDC3-203ENST00000494993 EPPK1P58107 5090 aaKnown RBP16.78■□□□□ 0.28
HDDC3-203ENST00000494993 A0A075B6Q4 140 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 OR2A4O95047 310 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 CRYZL1O95825 349 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 HIST1H1DP16402 221 aaKnown RBP16.78■□□□□ 0.28
HDDC3-203ENST00000494993 MAP2K4P45985 399 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 IDO2Q6ZQW0 420 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 PRSS48Q7RTY5 328 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 SRSF12Q8WXF0 261 aaKnown RBP16.78■□□□□ 0.28
HDDC3-203ENST00000494993 SNAPC3Q92966 411 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 TUBA4BQ9H853 241 aa16.78■□□□□ 0.28
HDDC3-203ENST00000494993 A0A0B4J203 849 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 IZUMO1RA6ND01 250 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 LINC00473A8K010 186 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 RAB27BO00194 218 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 PDCD5O14737 125 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 CRHBPP24387 322 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 OR10A3P58181 314 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 H1FOOQ8IZA3 346 aaPredicted RBP16.77■□□□□ 0.28
HDDC3-203ENST00000494993 PEMTQ9UBM1 199 aa16.77■□□□□ 0.28
HDDC3-203ENST00000494993 SHISA3A0PJX4 238 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 ERICH4A6NGS2 130 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 MPPED1O15442 326 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 RAB6AP20340 208 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 MECP2P51608 486 aaKnown RBP16.76■□□□□ 0.27
HDDC3-203ENST00000494993 Q6ZS49 121 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 OR2K2Q8NGT1 345 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 OSR1Q8TAX0 266 aaPredicted RBP16.76■□□□□ 0.27
HDDC3-203ENST00000494993 NRG4Q8WWG1 115 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 ACOT12Q8WYK0 555 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 CENPOQ9BU64 300 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 AKIP1Q9NQ31 210 aa16.76■□□□□ 0.27
HDDC3-203ENST00000494993 TRAV1-2A0A0B4J238 106 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 FAM223BA6NKX1 122 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 IFITM5A6NNB3 132 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 BMPR1BO00238 502 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 IFNA6P05013 189 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 TALDO1P37837 337 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 RHOGP84095 191 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 ARFRP1Q13795 201 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 EXOSC2Q13868 293 aaKnown RBP16.75■□□□□ 0.27
HDDC3-203ENST00000494993 SSX1Q16384 188 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 FAM223AQ8IWN6 122 aa16.75■□□□□ 0.27
HDDC3-203ENST00000494993 IGKV1D-8A0A087WSZ0 117 aa16.74■□□□□ 0.27
HDDC3-203ENST00000494993 TRBV9A0A0B4J1U6 114 aa16.74■□□□□ 0.27
HDDC3-203ENST00000494993 ANKRD65E5RJM6 399 aa16.74■□□□□ 0.27
HDDC3-203ENST00000494993 AIREO43918 545 aa16.74■□□□□ 0.27
HDDC3-203ENST00000494993 PRH1P02810 166 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms