RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 AADACP22760 399 aa12.7□□□□□ -0.38
TRIM13-208ENST00000478111 CALRP27797 417 aaKnown RBP12.7□□□□□ -0.38
TRIM13-208ENST00000478111 TRAM1Q15629 374 aa12.7□□□□□ -0.38
TRIM13-208ENST00000478111 DDB2Q92466 427 aa12.7□□□□□ -0.38
TRIM13-208ENST00000478111 ISOC1Q96CN7 298 aa12.7□□□□□ -0.38
TRIM13-208ENST00000478111 V9GY05 133 aa12.7□□□□□ -0.38
TRIM13-208ENST00000478111 MSGN1A6NI15 193 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 H0Y980 276 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 DIRAS3O95661 229 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 APELAP0DMC3 54 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 PSMA1P25786 263 aaKnown RBP12.69□□□□□ -0.38
TRIM13-208ENST00000478111 TAGLNQ01995 201 aaKnown RBP12.69□□□□□ -0.38
TRIM13-208ENST00000478111 MLLT11Q13015 90 aaPredicted RBP12.69□□□□□ -0.38
TRIM13-208ENST00000478111 HES5Q5TA89 166 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 ADAD2Q8NCV1 583 aaKnown RBP12.69□□□□□ -0.38
TRIM13-208ENST00000478111 OR10J5Q8NHC4 309 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 MAFIPQ8WZ33 124 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 RAB3CQ96E17 227 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 COA4Q9NYJ1 87 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 ZNF230Q9UIE0 474 aaPredicted RBP12.69□□□□□ -0.38
TRIM13-208ENST00000478111 RAB22AQ9UL26 194 aa12.69□□□□□ -0.38
TRIM13-208ENST00000478111 LINC00473A8K010 186 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 RAB27BO00194 218 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 SHOXO15266 292 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
TRIM13-208ENST00000478111 PRSS8Q16651 343 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 ADAMTSL5Q6ZMM2 481 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 TEX45Q8NA69 505 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 VCXQ9H320 206 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 NKX1-2Q9UD57 310 aaPredicted RBP12.68□□□□□ -0.38
TRIM13-208ENST00000478111 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
TRIM13-208ENST00000478111 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 SHISA3A0PJX4 238 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 MFNGO00587 321 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 RGS10O43665 173 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 OR9G9P0C7N8 305 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 RRASP10301 218 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 GNB3P16520 340 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 MAP2K4P45985 399 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 AQP4P55087 323 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 UBE2KP61086 200 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 LINC00322Q6ZN03 302 aaPredicted RBP12.67□□□□□ -0.38
TRIM13-208ENST00000478111 IDO2Q6ZQW0 420 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 OR10R2Q8NGX6 335 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 NRG4Q8WWG1 115 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 MGLLQ99685 303 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 ALMS1Q8TCU4 4167 aa12.67□□□□□ -0.38
TRIM13-208ENST00000478111 TRBV9A0A0B4J1U6 114 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 BMPR1BO00238 502 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 OR2A4O95047 310 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 PSMD7P51665 324 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
TRIM13-208ENST00000478111 ZNF45Q02386 682 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 TNXAQ16473 311 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 TATDN3Q17R31 274 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 RPEL1Q2QD12 228 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 Q6ZS49 121 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 H1FOOQ8IZA3 346 aaPredicted RBP12.66□□□□□ -0.38
TRIM13-208ENST00000478111 Q8N402 240 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 SRSF12Q8WXF0 261 aaKnown RBP12.66□□□□□ -0.38
TRIM13-208ENST00000478111 PHB2Q99623 299 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 ACOT13Q9NPJ3 140 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 AKIP1Q9NQ31 210 aa12.66□□□□□ -0.38
TRIM13-208ENST00000478111 CRYZL1O95825 349 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 PRH1P02810 166 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 HIST1H1DP16402 221 aaKnown RBP12.65□□□□□ -0.38
TRIM13-208ENST00000478111 CRHBPP24387 322 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 OR10A3P58181 314 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 CBX3Q13185 183 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 SSX1Q16384 188 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 VMA21Q3ZAQ7 101 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 LCN12Q6JVE5 192 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 PRSS48Q7RTY5 328 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 SNAPC3Q92966 411 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
TRIM13-208ENST00000478111 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
TRIM13-208ENST00000478111 DMRT1Q9Y5R6 373 aa12.65□□□□□ -0.38
TRIM13-208ENST00000478111 A0A075B6Q4 140 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 ANKRD65E5RJM6 399 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 RANBP1P43487 201 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 RHOGP84095 191 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 GTSCR1Q86UQ5 136 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 OSR1Q8TAX0 266 aaPredicted RBP12.64□□□□□ -0.39
TRIM13-208ENST00000478111 ADTRPQ96IZ2 230 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 CCDC90BQ9GZT6 254 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 TUBA4BQ9H853 241 aa12.64□□□□□ -0.39
TRIM13-208ENST00000478111 A0A0B4J203 849 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 FAM223BA6NKX1 122 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 IFITM5A6NNB3 132 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 ZNF785A8K8V0 405 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 RAB6AP20340 208 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 GADD45AP24522 165 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 EXOSC2Q13868 293 aaKnown RBP12.63□□□□□ -0.39
TRIM13-208ENST00000478111 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 FAM223AQ8IWN6 122 aa12.63□□□□□ -0.39
TRIM13-208ENST00000478111 TTC9CQ8N5M4 171 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms