RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 FLYWCH2Q96CP2 140 aaKnown RBP9.86□□□□□ -0.83
SKA1-203ENST00000417656 NOL4LQ96MY1 436 aaPredicted RBP9.86□□□□□ -0.83
SKA1-203ENST00000417656 TSNAXQ99598 290 aaKnown RBP9.86□□□□□ -0.83
SKA1-203ENST00000417656 HSD17B10Q99714 261 aaKnown RBP9.86□□□□□ -0.83
SKA1-203ENST00000417656 SOSTQ9BQB4 213 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 TPSG1Q9NRR2 321 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 METTL1Q9UBP6 276 aaKnown RBP9.86□□□□□ -0.83
SKA1-203ENST00000417656 LINC00527Q9UJ94 153 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 KCNAB3O43448 404 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 SLC25A17O43808 307 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 FBXO24O75426 580 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 SPDEFO95238 335 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 IGLV2-23P01705 113 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 RRASP10301 218 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 CD28P10747 220 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 TBPP20226 339 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 TAS2R19P59542 299 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 NDPQ00604 133 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 TAGLNQ01995 201 aaKnown RBP9.85□□□□□ -0.83
SKA1-203ENST00000417656 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
SKA1-203ENST00000417656 PSG5Q15238 335 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 TMEM177Q53S58 311 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 FAAP20Q6NZ36 180 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 ZNF66Q6ZN08 573 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 FOXRED2Q8IWF2 684 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 TMEM229BQ8NBD8 167 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 OR6F1Q8NGZ6 308 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 RNF5Q99942 180 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 PRELID3BQ9Y3B1 194 aa9.85□□□□□ -0.83
SKA1-203ENST00000417656 TET2Q6N021 2002 aaPredicted RBP9.85□□□□□ -0.83
SKA1-203ENST00000417656 IGHV7-81A0A0B4J1V7 117 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 AP4M1O00189 453 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 SHOXO15266 292 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 GSTZ1O43708 216 aaPredicted RBP9.84□□□□□ -0.83
SKA1-203ENST00000417656 RAB3DO95716 219 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 CD74P04233 296 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 GNRHRP30968 328 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 PPP5CP53041 499 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 ZNF79Q15937 498 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 AADACL3Q5VUY0 350 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 LIN54Q6MZP7 749 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 STEAP1BQ6NZ63 245 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 CENPVQ7Z7K6 275 aaPredicted RBP9.84□□□□□ -0.83
SKA1-203ENST00000417656 CCDC190Q86UF4 302 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 STPG2Q8N412 459 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 MFSD4AQ8N468 514 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 ZBTB34Q8NCN2 500 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 OR6Q1Q8NGQ2 317 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 OR51H1Q8NH63 302 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 OR4S2Q8NH73 311 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 CLCC1Q96S66 551 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 PARP11Q9NR21 331 aa9.84□□□□□ -0.83
SKA1-203ENST00000417656 PSMB11A5LHX3 300 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 SRRM4A7MD48 611 aaKnown RBP9.83□□□□□ -0.84
SKA1-203ENST00000417656 FCN1O00602 326 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 ATP6V0E1O15342 81 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 CA2P00918 260 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 RLN1P04808 185 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 IFNA6P05013 189 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 CSF1P09603 554 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 BRWD1-AS2P59051 145 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 CATR1Q13166 79 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 PYDC2Q56P42 97 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 ZNF329Q86UD4 541 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 ARRDC1Q8N5I2 433 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 OR5AU1Q8NGC0 362 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 OR4C16Q8NGL9 310 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 OSR1Q8TAX0 266 aaPredicted RBP9.83□□□□□ -0.84
SKA1-203ENST00000417656 CHPT1Q8WUD6 406 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 BORCS5Q969J3 196 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 TRIM63Q969Q1 353 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 CITED2Q99967 270 aaPredicted RBP9.83□□□□□ -0.84
SKA1-203ENST00000417656 OR51J1Q9H342 316 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 FBXO7Q9Y3I1 522 aa9.83□□□□□ -0.84
SKA1-203ENST00000417656 GPR31O00270 319 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 RAMP3O60896 148 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 SAA1P0DJI8 122 aaPredicted RBP9.82□□□□□ -0.84
SKA1-203ENST00000417656 PGAM2P15259 253 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 KIR2DS2P43631 304 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 LGALS7P47929 136 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 VMA21Q3ZAQ7 101 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 PHLDA2Q53GA4 152 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 TCTEX1D4Q5JR98 221 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 SPANXN2Q5MJ10 180 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 LHFPL1Q86WI0 220 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 OR4X2Q8NGF9 303 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 ABHD5Q8WTS1 349 aa9.82□□□□□ -0.84
SKA1-203ENST00000417656 ANKRD20A5PA0PJZ0 165 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 A6NHS1 94 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 PGLYRP1O75594 196 aaPredicted RBP9.81□□□□□ -0.84
SKA1-203ENST00000417656 TSPAN15O95858 294 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 IGF1P05019 195 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 CRYGBP07316 175 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 ZNF735P0CB33 412 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 AKAIN1P0CW23 69 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 VDAC1P21796 283 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 UBE2KP61086 200 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 GNB1P62873 340 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 SLC35B1P78383 322 aa9.81□□□□□ -0.84
SKA1-203ENST00000417656 CX3CL1P78423 397 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms