RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 EIF4EBP1Q13541 118 aaPredicted RBP16.7■□□□□ 0.26
PRKCD-202ENST00000394729 HSD17B10Q99714 261 aaKnown RBP16.7■□□□□ 0.26
PRKCD-202ENST00000394729 MFSD2BA6NFX1 497 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 Q6ZRG5 221 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 FBXO7Q9Y3I1 522 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 MMP24Q9Y5R2 645 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 FAM157CP0CG43 387 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 RNF224P0DH78 156 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 LOXP28300 417 aaPredicted RBP16.69■□□□□ 0.26
PRKCD-202ENST00000394729 IL22RA2Q969J5 263 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 BARX1Q9HBU1 254 aaPredicted RBP16.69■□□□□ 0.26
PRKCD-202ENST00000394729 NAV3Q8IVL0 2385 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 COX7A1P24310 79 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 ZNF383Q8NA42 475 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 RSG1Q9BU20 258 aa16.69■□□□□ 0.26
PRKCD-202ENST00000394729 BORCS7-ASMTA0A0B4J1R7 106 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 CLEC18AA5D8T8 446 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 RPL23AP62750 156 aaKnown RBP16.68■□□□□ 0.26
PRKCD-202ENST00000394729 CLEC18CQ8NCF0 446 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 OR10X1Q8NGY0 326 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 RAB29O14966 203 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 TNFRSF9Q07011 255 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 EFNB3Q15768 340 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 TUSC1Q2TAM9 212 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 STX12Q86Y82 276 aa16.68■□□□□ 0.26
PRKCD-202ENST00000394729 RPUSD1Q9UJJ7 312 aaKnown RBP16.68■□□□□ 0.26
PRKCD-202ENST00000394729 TET2Q6N021 2002 aaPredicted RBP16.67■□□□□ 0.26
PRKCD-202ENST00000394729 APOC3P02656 99 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 GPR157Q5UAW9 335 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 LILRB2Q8N423 598 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 FAM213BQ8TBF2 198 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 PHYHIPLQ96FC7 376 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 BBC3Q96PG8 261 aaPredicted RBP16.67■□□□□ 0.26
PRKCD-202ENST00000394729 ZFP57Q9NU63 452 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 LINC00312Q9Y6C7 94 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 DUXBA0A1W2PPF3 345 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 ZNF729A6NN14 1252 aaPredicted RBP16.67■□□□□ 0.26
PRKCD-202ENST00000394729 TAAR5O14804 337 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 ATP6V0CP27449 155 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 LSM10Q969L4 123 aaKnown RBP16.67■□□□□ 0.26
PRKCD-202ENST00000394729 C11orf1Q9H5F2 150 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 LPAR3Q9UBY5 353 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 PRELID3BQ9Y3B1 194 aa16.67■□□□□ 0.26
PRKCD-202ENST00000394729 NUPL2O15504 423 aaKnown RBP16.66■□□□□ 0.26
PRKCD-202ENST00000394729 THNSL2Q86YJ6 484 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 ZBTB34Q8NCN2 500 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 OR2G3Q8NGZ4 309 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 LRRC20Q8TCA0 184 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 RHOVQ96L33 236 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 GPR37O15354 613 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 MRPL20Q9BYC9 149 aaKnown RBP16.66■□□□□ 0.26
PRKCD-202ENST00000394729 SLC25A31Q9H0C2 315 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 GAL3ST2Q9H3Q3 398 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 SIRT7Q9NRC8 400 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 NUP50Q9UKX7 468 aa16.66■□□□□ 0.26
PRKCD-202ENST00000394729 DAOP14920 347 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 ZNF66Q6ZN08 573 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 SSX8Q7RTT4 187 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 ZNF251Q9BRH9 671 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.65■□□□□ 0.26
PRKCD-202ENST00000394729 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.65■□□□□ 0.264e-7■■■■□ 21
PRKCD-202ENST00000394729 TOR1AO14656 332 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 HAPLN4Q86UW8 402 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 OR4A16Q8NH70 328 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 TMEM140Q9NV12 185 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 ONECUT1Q9UBC0 465 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 UBE2L5PA0A1B0GUS4 154 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 DEFA4P12838 97 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 CAMLGP49069 296 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 PAX5Q02548 391 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 MSMO1Q15800 293 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 C4orf17Q53FE4 359 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 UBAC2Q8NBM4 344 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 BPIFCQ8NFQ6 507 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 DTD1Q8TEA8 209 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 TREM1Q9NP99 234 aa16.65■□□□□ 0.26
PRKCD-202ENST00000394729 WNT2P09544 360 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 APELAP0DMC3 54 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 DEFA5Q01523 94 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 RAB1BQ9H0U4 201 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 AUP1Q9Y679 476 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 SESN1Q9Y6P5 492 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 ERVK-16P61578 105 aa16.64■□□□□ 0.25
PRKCD-202ENST00000394729 HMGB3O15347 200 aaKnown RBP16.63■□□□□ 0.25
PRKCD-202ENST00000394729 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 ELLP55199 621 aaPredicted RBP16.63■□□□□ 0.25
PRKCD-202ENST00000394729 MIDNQ504T8 468 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 AKIRIN2Q53H80 203 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 CBLN4Q9NTU7 201 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 SRRM4A7MD48 611 aaKnown RBP16.63■□□□□ 0.25
PRKCD-202ENST00000394729 ENSAO43768 121 aaKnown RBP16.63■□□□□ 0.25
PRKCD-202ENST00000394729 RAB7AP51149 207 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 ARF6P62330 175 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 ABHD12Q8N2K0 398 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 ZNF439Q8NDP4 499 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 OR4C12Q96R67 309 aa16.63■□□□□ 0.25
PRKCD-202ENST00000394729 RAB40CQ96S21 281 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms