RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 STEAP1BQ6NZ63 245 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 ZNF66Q6ZN08 573 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 BVESQ8NE79 360 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 OR4D10Q8NGI6 311 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 BORCS5Q969J3 196 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 TRIM63Q969Q1 353 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 HARBI1Q96MB7 349 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 GPHA2Q96T91 129 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 TSNAXQ99598 290 aaKnown RBP10.17□□□□□ -0.78
SRSF3-201ENST00000339436 CITED1Q99966 193 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 HSPB9Q9BQS6 159 aa10.17□□□□□ -0.78
SRSF3-201ENST00000339436 KCNAB3O43448 404 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 TNFSF12O43508 249 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 FCGR3BO75015 233 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 RAB3DO95716 219 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 CRYZL1O95825 349 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 IFNA6P05013 189 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 OR2B11Q5JQS5 317 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 AADACL3Q5VUY0 350 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 SLC35E3Q7Z769 313 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 LHFPL1Q86WI0 220 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 TCTEX1D2Q8WW35 142 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 FBXL15Q9H469 300 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 PRELID3BQ9Y3B1 194 aa10.16□□□□□ -0.78
SRSF3-201ENST00000339436 ANKRD20A5PA0PJZ0 165 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 SHOXO15266 292 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 IGLV2-23P01705 113 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 LGALS7P47929 136 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 RPS16P62249 146 aaKnown RBP10.15□□□□□ -0.78
SRSF3-201ENST00000339436 CATR1Q13166 79 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 MEF2DQ14814 521 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 PSG5Q15238 335 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 PYDC2Q56P42 97 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 FAAP20Q6NZ36 180 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 FOXRED2Q8IWF2 684 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 Q8N402 240 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 MFSD4AQ8N468 514 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 OR4C16Q8NGL9 310 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 OSR1Q8TAX0 266 aaPredicted RBP10.15□□□□□ -0.78
SRSF3-201ENST00000339436 TPSG1Q9NRR2 321 aa10.15□□□□□ -0.78
SRSF3-201ENST00000339436 METTL1Q9UBP6 276 aaKnown RBP10.15□□□□□ -0.78
SRSF3-201ENST00000339436 IGHV7-81A0A0B4J1V7 117 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 LINC01548A6NM66 108 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 AP4M1O00189 453 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 GPR31O00270 319 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 SLC25A17O43808 307 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 AKAIN1P0CW23 69 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 KIR2DS2P43631 304 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 BRWD1-AS2P59051 145 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 PLGLAQ15195 96 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 SLC38A6Q8IZM9 456 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 NOL4LQ96MY1 436 aaPredicted RBP10.14□□□□□ -0.79
SRSF3-201ENST00000339436 SRRQ9GZT4 340 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 ZNF580Q9UK33 172 aa10.14□□□□□ -0.79
SRSF3-201ENST00000339436 SRRM4A7MD48 611 aaKnown RBP10.13□□□□□ -0.79
SRSF3-201ENST00000339436 RBFOX2O43251 390 aaKnown RBP eCLIP10.13□□□□□ -0.79
SRSF3-201ENST00000339436 FBXO24O75426 580 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 RLN1P04808 185 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 ZNF735P0CB33 412 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 PPP5CP53041 499 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 UCP3P55916 312 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 NDPQ00604 133 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 CNPY1Q3B7I2 92 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 LIN54Q6MZP7 749 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 CMTM1Q8IZ96 169 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 STPG2Q8N412 459 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 CHPT1Q8WUD6 406 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 THAP7Q9BT49 309 aaPredicted RBP10.13□□□□□ -0.79
SRSF3-201ENST00000339436 RSRP1Q9BUV0 290 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 BATF3Q9NR55 127 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 CMYA5Q8N3K9 4069 aa10.13□□□□□ -0.79
SRSF3-201ENST00000339436 ATP6V0E1O15342 81 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 RAMP3O60896 148 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
SRSF3-201ENST00000339436 IGF1P05019 195 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 CRYGBP07316 175 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 UBE2KP61086 200 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 KLF9Q13886 244 aaPredicted RBP10.12□□□□□ -0.79
SRSF3-201ENST00000339436 SCGB2B2Q4G0G5 96 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 PHLDA2Q53GA4 152 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 LPCAT3Q6P1A2 487 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 SPAG16Q8N0X2 631 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 C11orf44Q8N8P7 122 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 MRGPRFQ96AM1 343 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 OR51J1Q9H342 316 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 SLC2A9Q9NRM0 540 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 LINC00527Q9UJ94 153 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 NBEAL1Q6ZS30 2694 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 PSMB11A5LHX3 300 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 DISC1C4P0D8 188 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 FCN1O00602 326 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 CA2P00918 260 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 SAA1P0DJI8 122 aaPredicted RBP10.12□□□□□ -0.79
SRSF3-201ENST00000339436 VMA21Q3ZAQ7 101 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
SRSF3-201ENST00000339436 CENPVQ7Z7K6 275 aaPredicted RBP10.12□□□□□ -0.79
SRSF3-201ENST00000339436 PPP1R27Q86WC6 154 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms