RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gls2Q571F8 602 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Ndufa6Q9CQZ5 131 aaKnown RBP16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Q9CRC3 126 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Phf7Q9DAG9 307 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gabrg1Q9R0Y8 465 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Ntn3Q9R1A3 580 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 DeddQ9Z1L3 318 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Dock10Q8BZN6 2150 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Tet1Q3URK3 2007 aaKnown RBP16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Rps2-ps6A0A140T8L5 221 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Slc25a53A2AF28 346 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Ankrd65F6YK91 380 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Gm2075J3QMW5 144 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Mtatp6P00848 226 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Meox2P32443 303 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Rab5cP35278 216 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Lbx1P52955 282 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Cpne2P59108 548 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Pcbd1P61458 104 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 BB287469Q3UT53 144 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 PnlipQ6P8U6 465 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Olfr688Q6W049 321 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 AtcayQ8BHE3 372 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Glo1Q9CPU0 184 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Tmem100Q9CQG9 134 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 Mrpl18Q9CQL5 180 aa16.15■□□□□ 0.18
Shkbp1-201ENSMUST00000003857 2610044O15Rik8A0A087WRJ1 410 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1150-ps1A0A1L1STL1 316 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm36864A0A1Y7VJE6 447 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Vmn1r129E9QA94 307 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm8265K7N6Y8 158 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm8720K9J7F4 307 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Il9rQ01114 468 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Prrc1Q3UPH1 443 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Jagn1Q5XKN4 183 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Klk1b21Q61759 261 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cypt4Q6P925 153 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Zfp874bQ7M6X2 447 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Zfp429Q7M6Y0 485 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ell3Q80VR2 395 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Eif5a2Q8BGY2 153 aaKnown RBP16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Lhfpl3Q9CTN8 222 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cst6Q9D1B1 149 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ndufa7Q9Z1P6 113 aaKnown RBP16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ighv6-5A0A0A6YWS9 119 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 B4galt1P15535 399 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ceacam12Q3UKP4 300 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Eif4e1bQ3UTA9 244 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rpp14Q9CQH8 122 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Borcs8Q9D6Y4 120 aa16.14■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Igkv13-85A0A075B666 115 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr587-ps1A0A1B0GSS1 159 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Fthl17bA2AHC5 176 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Fthl17cA2AHC6 176 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 RnlsA7RDN6 342 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr895L7N210 316 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ercc1P07903 298 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ascl1Q02067 231 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Fthl17fQ3SXD2 176 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 GalnsQ571E4 520 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1026Q7TR90 307 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cdk3Q80YP0 303 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Zfp3Q8BLB0 497 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm9817Q9D2M0 144 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 StrapQ9Z1Z2 350 aaKnown RBP16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 FrylF8VQ05 3007 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm6880A3KG45 208 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 NppaP05125 152 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 SnrpeP62305 92 aaKnown RBP16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Ppp1ccP63087 323 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Snrnp70Q62376 448 aaKnown RBP16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 S100a15aQ6S5I3 108 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr921Q7TRC0 313 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Alkal2Q80UG6 151 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 TskuQ8CBR6 354 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr803Q8VFI3 308 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr1298Q8VGE6 312 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cyb5bQ9CQX2 146 aaKnown RBP16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Srp19Q9D7A6 144 aa16.13■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Lama1P19137 3084 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Zfp69A2A761 587 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cyb561d1A2AE42 229 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rnf150Q5DTZ6 437 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gpank1Q61858 372 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm5111Q8C9M4 190 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gpr84Q8CIM5 396 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Mrps18cQ8R2L5 143 aaKnown RBP16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Sft2d2Q8VD57 159 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr829Q8VGX1 321 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Olfr638Q8VH20 321 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 TinagQ9WUR0 475 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Cacna1bO55017 2327 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm11361A0A1Y7VKY1 152 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Scgb1b29D2XZ31 93 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 SpxD3Z752 116 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Scgb1b20E9PWZ2 93 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Gm5039J3QNT6 144 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 H2-DMaP28078 261 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 LepP41160 167 aa16.12■□□□□ 0.17
Shkbp1-201ENSMUST00000003857 Rps18P62270 152 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms