RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TFAP2AP05549 437 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 FCGR3AP08637 254 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 INSL3P51460 131 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 RPS16P62249 146 aaKnown RBP18.28■□□□□ 0.52
RAB40C-209ENST00000565511 PJVKQ0ZLH3 352 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 ZNF562Q6V9R5 426 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 GRPEL2Q8TAA5 225 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 RNF5Q99942 180 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 CABLES2Q9BTV7 478 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 GHITMQ9H3K2 345 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 ZNF221Q9UK13 617 aa18.28■□□□□ 0.52
RAB40C-209ENST00000565511 TNCP24821 2201 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 FABP7O15540 132 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 SPDEFO95238 335 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 GSTT2P0CG29 244 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 GSTT2BP0CG30 244 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 TPPP2P59282 170 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 DEFA5Q01523 94 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 TBCEQ15813 527 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-209ENST00000565511 AKIRIN2Q53H80 203 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 ZNF429Q86V71 674 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 PDPNQ86YL7 162 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 OR4A4PQ8NGN8 299 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 RHOVQ96L33 236 aa18.27■□□□□ 0.52
RAB40C-209ENST00000565511 TSNAXQ99598 290 aaKnown RBP18.27■□□□□ 0.52
RAB40C-209ENST00000565511 ZNF230Q9UIE0 474 aaPredicted RBP18.27■□□□□ 0.52
RAB40C-209ENST00000565511 DYNC2H1Q8NCM8 4307 aaKnown RBP18.27■□□□□ 0.52
RAB40C-209ENST00000565511 MFNGO00587 321 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 BET1O15155 118 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 CRYGBP07316 175 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 GNB3P16520 340 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 MRGPRG-AS1Q2M3A8 158 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 ACSM6Q6P461 480 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 IZUMO2Q6UXV1 221 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 NR2C2APQ86WQ0 139 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 RAB3CQ96E17 227 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 OR2D2Q9H210 308 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 ACOT13Q9NPJ3 140 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 SLC35D1Q9NTN3 355 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 SDHAF2Q9NX18 166 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 ELF5Q9UKW6 265 aaPredicted RBP18.26■□□□□ 0.51
RAB40C-209ENST00000565511 RAB22AQ9UL26 194 aa18.26■□□□□ 0.51
RAB40C-209ENST00000565511 IGKV1D-8A0A087WSZ0 117 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 RAB27BO00194 218 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 APOA2P02652 100 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 OR8U9P0C7N5 309 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 TMEM267Q0VDI3 215 aaPredicted RBP18.25■□□□□ 0.51
RAB40C-209ENST00000565511 FXYD3Q14802 87 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 ZNF367Q7RTV3 350 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 CNBD2Q96M20 576 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 SMAD5-AS1Q9Y6J3 95 aa18.25■□□□□ 0.51
RAB40C-209ENST00000565511 A0A075B6Q4 140 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 TRBV6-7A0A0A0MS04 114 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 SMIM30A4D0T7 59 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 TRIM64CA6NLI5 447 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 TRGV3P03979 118 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 PYHIN1Q6K0P9 492 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 OVCH2Q7RTZ1 564 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 SBSPONQ8IVN8 264 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.24■□□□□ 0.51
RAB40C-209ENST00000565511 OR10R2Q8NGX6 335 aa18.24■□□□□ 0.51
RAB40C-209ENST00000565511 FLYWCH2Q96CP2 140 aaKnown RBP18.24■□□□□ 0.51
RAB40C-209ENST00000565511 TRAV1-2A0A0B4J238 106 aa18.23■□□□□ 0.51
RAB40C-209ENST00000565511 SRRM4A7MD48 611 aaKnown RBP18.23■□□□□ 0.51
RAB40C-209ENST00000565511 HSPB1P04792 205 aaKnown RBP18.23■□□□□ 0.51
RAB40C-209ENST00000565511 OR5T1Q8NG75 326 aa18.23■□□□□ 0.51
RAB40C-209ENST00000565511 NDUFB11Q9NX14 153 aa18.23■□□□□ 0.51
RAB40C-209ENST00000565511 IFITM5A6NNB3 132 aa18.22■□□□□ 0.51
RAB40C-209ENST00000565511 GP9P14770 177 aa18.22■□□□□ 0.51
RAB40C-209ENST00000565511 HIST1H1DP16402 221 aaKnown RBP18.22■□□□□ 0.51
RAB40C-209ENST00000565511 POC5Q8NA72 575 aa18.22■□□□□ 0.51
RAB40C-209ENST00000565511 BVESQ8NE79 360 aa18.22■□□□□ 0.51
RAB40C-209ENST00000565511 RBMXL2O75526 392 aaKnown RBP18.21■□□□□ 0.51
RAB40C-209ENST00000565511 SERPINB10P48595 397 aa18.21■□□□□ 0.51
RAB40C-209ENST00000565511 HARBI1Q96MB7 349 aa18.21■□□□□ 0.51
RAB40C-209ENST00000565511 PITPNAQ00169 270 aa18.2■□□□□ 0.5
RAB40C-209ENST00000565511 C22orf42Q6IC83 251 aa18.2■□□□□ 0.5
RAB40C-209ENST00000565511 OR10J5Q8NHC4 309 aa18.2■□□□□ 0.5
RAB40C-209ENST00000565511 DDB2Q92466 427 aa18.2■□□□□ 0.5
RAB40C-209ENST00000565511 SLA2Q9H6Q3 261 aa18.2■□□□□ 0.5
RAB40C-209ENST00000565511 ADAM30Q9UKF2 790 aa18.2■□□□□ 0.5
RAB40C-209ENST00000565511 TRDV1A0A1B0GX56 115 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 PDCD5O14737 125 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 FRMD6-AS1P0C7T7 363 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 APELAP0DMC3 54 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 RAB6AP20340 208 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 PSMD7P51665 324 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 TMEM177Q53S58 311 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 H1FOOQ8IZA3 346 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-209ENST00000565511 ZNF355PQ9NSJ1 428 aa18.19■□□□□ 0.5
RAB40C-209ENST00000565511 ANKRD34BA5PLL1 514 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 LINC00473A8K010 186 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 CNIH1O95406 144 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 TRBV12-3P01733 135 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 RAB3BP20337 219 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 MYL9P24844 172 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 MRPS15P82914 257 aaKnown RBP18.18■□□□□ 0.5
RAB40C-209ENST00000565511 OR6Q1Q8NGQ2 317 aa18.18■□□□□ 0.5
RAB40C-209ENST00000565511 SRSF7Q16629 238 aaKnown RBP eCLIP18.17■□□□□ 0.5
RAB40C-209ENST00000565511 IDO2Q6ZQW0 420 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms