RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 MRPL51Q4U2R6 128 aaKnown RBP2.12□□□□□ -2.07
SNRPF-202ENST00000549580 SFXN4Q6P4A7 337 aa2.12□□□□□ -2.07
SNRPF-202ENST00000549580 BAP18Q8IXM2 172 aa2.12□□□□□ -2.07
SNRPF-202ENST00000549580 OR2D3Q8NGH3 330 aa2.12□□□□□ -2.07
SNRPF-202ENST00000549580 CPNE2Q96FN4 548 aaPredicted RBP2.12□□□□□ -2.07
SNRPF-202ENST00000549580 SLC25A44Q96H78 314 aaPredicted RBP2.12□□□□□ -2.07
SNRPF-202ENST00000549580 DIRAS2Q96HU8 199 aa2.12□□□□□ -2.07
SNRPF-202ENST00000549580 NKX6-2Q9C056 277 aaPredicted RBP2.12□□□□□ -2.07
SNRPF-202ENST00000549580 HHLA2Q9UM44 414 aa2.12□□□□□ -2.07
SNRPF-202ENST00000549580 PLCH2O75038 1416 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 TMED7-TICAM2A0A0A6YYA0 188 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 TGIF2-C20orf24A0A0A6YYL0 155 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 PSCAO43653 123 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 KRT75O95678 551 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 HLA-DQB2P05538 268 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 CTXN2P0C2S0 81 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 IGHV3-30-3P0DP02 117 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 NEFHP12036 1026 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 IDH3GP51553 393 aaPredicted RBP2.11□□□□□ -2.07
SNRPF-202ENST00000549580 LSM6P62312 80 aaKnown RBP2.11□□□□□ -2.07
SNRPF-202ENST00000549580 BASP1P80723 227 aaKnown RBP2.11□□□□□ -2.07
SNRPF-202ENST00000549580 MRPS25P82663 173 aaKnown RBP2.11□□□□□ -2.07
SNRPF-202ENST00000549580 HOXC5Q00444 222 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 PRDX4Q13162 271 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 PLPPR5Q32ZL2 321 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 AKIRIN2Q53H80 203 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 C1orf194Q5T5A4 169 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 SBSNQ6UWP8 590 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 CCDC121Q6ZUS5 278 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 ZNF550Q7Z398 422 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 C1orf174Q8IYL3 243 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 LRRC34Q8IZ02 419 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 RAD51AP1Q96B01 352 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 TVP23CQ96ET8 276 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 VPS29Q9UBQ0 182 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 VPREB3Q9UKI3 123 aa2.11□□□□□ -2.07
SNRPF-202ENST00000549580 ATAD5Q96QE3 1844 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 CRB1P82279 1406 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 A0A1B0GV50 99 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 IGSF23A1L1A6 192 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 TRAPPC3O43617 180 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 TCRBP04435 133 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 IFNA6P05013 189 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 CRYGDP07320 174 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 FAM228BP0C875 321 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 MARCKSL1P49006 195 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 SPCS3P61009 180 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 CCL7P80098 99 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 BAMBIQ13145 260 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 SPIN3Q5JUX0 258 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 TMEM31Q5JXX7 168 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 NOXRED1Q6NXP6 359 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 C5orf46Q6UWT4 87 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 SCXQ7RTU7 201 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 LY6G5BQ8NDX9 201 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 OR51D1Q8NGF3 324 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 IGF2BP2-AS1Q96M15 143 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 PKMYT1Q99640 499 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 HIGD2AQ9BW72 106 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 MND1Q9BWT6 205 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 PECRQ9BY49 303 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 FAM96AQ9H5X1 160 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.1□□□□□ -2.07
SNRPF-202ENST00000549580 SNX12Q9UMY4 172 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
SNRPF-202ENST00000549580 THSD7AQ9UPZ6 1657 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 CACNA1DQ01668 2161 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 COL18A1P39060 1754 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 DHRS12A0PJE2 317 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 CLDN24A6NM45 220 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 KPNA3O00505 521 aaPredicted RBP2.09□□□□□ -2.07
SNRPF-202ENST00000549580 APOMO95445 188 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 IGLV6-57P01721 117 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 OR5G3P0C626 314 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 P0C880 135 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 ESDP10768 282 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 SLC25A16P16260 332 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 ALOX5APP20292 161 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 MAP2K4P45985 399 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 CDK9P50750 372 aaKnown RBP2.09□□□□□ -2.07
SNRPF-202ENST00000549580 TSPEAR-AS2P59090 65 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 SRSF6Q13247 344 aaKnown RBP2.09□□□□□ -2.07
SNRPF-202ENST00000549580 SPA17Q15506 151 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 CST6Q15828 149 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 RASL11AQ6T310 242 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 AMTNQ6UX39 209 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 CLDN22Q8N7P3 220 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 OR2T27Q8NH04 317 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 OR10A6Q8NH74 314 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 C12orf43Q96C57 262 aaKnown RBP2.09□□□□□ -2.07
SNRPF-202ENST00000549580 MGLLQ99685 303 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 UPK3BQ9BT76 320 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 CCDC94Q9BW85 323 aaPredicted RBP2.09□□□□□ -2.07
SNRPF-202ENST00000549580 IL20Q9NYY1 176 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 ZNF337Q9Y3M9 751 aa2.09□□□□□ -2.07
SNRPF-202ENST00000549580 ZSWIM8A7E2V4 1837 aa2.09□□□□□ -2.08
SNRPF-202ENST00000549580 ADAMTSL1Q8N6G6 1762 aa2.08□□□□□ -2.08
SNRPF-202ENST00000549580 NAV1Q8NEY1 1877 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms