RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 HEPN1Q6WQI6 88 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SVBPQ8N300 66 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 LINC00311Q8N616 119 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF485Q8NCK3 441 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR10D4PQ8NGN7 298 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SLC25A28Q96A46 364 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PINX1Q96BK5 328 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 WDFY2Q96P53 400 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CCL13Q99616 98 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 NKX3-1Q99801 234 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 GINS4Q9BRT9 223 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 FAAP24Q9BTP7 215 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ISG20L2Q9H9L3 353 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR2S2Q9NQN1 319 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 TXNL4BQ9NX01 149 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 RNF150Q9ULK6 438 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 FREM3P0C091 2139 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 NAP1L6A6NFF2 107 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR5H14A6NHG9 310 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 F6UZH7 168 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CLDN34H7C241 214 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SLC33A1O00400 549 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CDRT1O95170 752 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 GYPAP02724 150 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SFTPBP07988 381 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 IL6RP08887 468 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HOXB5P09067 269 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 FAM106CPP0CH98 169 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 RCC1P18754 421 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HOXA5P20719 270 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PRSS3P35030 304 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CDX1P47902 265 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 DYNLT3P51808 116 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 RAB25P57735 213 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 NCS1P62166 190 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SRPXP78539 464 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PAX8Q06710 450 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PSG3Q16557 428 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 KRTAP21-3Q3LHN1 58 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 COX19Q49B96 90 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SFXN4Q6P4A7 337 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CNIH2Q6PI25 160 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 Q6ZS49 121 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CMTM1Q8IZ96 169 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR10R2Q8NGX6 335 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR4F5Q8NH21 305 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ZNRF4Q8WWF5 429 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 RPEQ96AT9 228 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 Q96M66 194 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CCDC32Q9BV29 185 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 NPFFR1Q9GZQ6 430 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ATG5Q9H1Y0 275 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ABCG5Q9H222 651 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 KIAA1456Q9P272 454 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 DPM3Q9P2X0 92 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 COMMD3Q9UBI1 195 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 MMP24Q9Y5R2 645 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HCFC1P51610 2035 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 NBASA2RRP1 2371 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 IGHV4-61A0A0C4DH41 118 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 KBTBD11-OT1A0A1B0GTJ5 212 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 TMEM14DPA8MWL7 114 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 GNG7O60262 68 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 CRLF1O75462 422 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 SC5DO75845 299 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 SIX6O95475 246 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 OR2H2O95918 312 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 BCL3P20749 454 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 ZBTB25P24278 435 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 RPS25P62851 125 aaKnown RBP2.96□□□□□ -1.93
PTPN22-211ENST00000538253 FOXL1Q12952 345 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 PEA15Q15121 130 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 RTL8BQ17RB0 113 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 LRRC75BQ2VPJ9 315 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 IDNKQ5T6J7 187 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 OLFML2AQ68BL7 652 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 NHLRC2Q8NBF2 726 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 LY6G5BQ8NDX9 201 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 OR2AK2Q8NG84 335 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 OR4C13Q8NGP0 309 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 OR10X1Q8NGY0 326 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 COQ8AQ8NI60 647 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 VSTM2AQ8TAG5 236 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 UBE2FQ969M7 185 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 GAFA1Q96PS6 74 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 CLCC1Q96S66 551 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 SLC6A7Q99884 636 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF222Q9UK12 451 aa2.96□□□□□ -1.93
PTPN22-211ENST00000538253 LOC102724200A0A096LPH7 203 aaPredicted RBP2.96□□□□□ -1.94
PTPN22-211ENST00000538253 IGHV1-69DA0A0B4J2H0 117 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 C17orf98A8MV24 154 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 SIRPB1O00241 398 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 TNFRSF13BO14836 293 aaPredicted RBP2.96□□□□□ -1.94
PTPN22-211ENST00000538253 IGHV1-69P01742 117 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 GNRHRP30968 328 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 RAG2P55895 527 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 SLC35B1P78383 322 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 HLA-DRB3P79483 266 aa2.96□□□□□ -1.94
PTPN22-211ENST00000538253 C5orf47Q569G3 176 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms