RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 TNFAIP8L1Q8WVP5 186 aa0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 CIDECQ96AQ7 238 aaPredicted RBP0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 HINT2Q9BX68 163 aa0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 COMMD9Q9P000 198 aa0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 SNX10Q9Y5X0 201 aa0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 NBEAQ8NFP9 2946 aa0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 BDP1A6H8Y1 2624 aa0.16□□□□□ -2.38
RN7SKP287-201ENST00000516546 ASH1LQ9NR48 2969 aaKnown RBP0.15□□□□□ -2.38
RN7SKP287-201ENST00000516546 PIEZO2Q9H5I5 2752 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 A0A1B0GX12 115 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 GEMIN2O14893 280 aaKnown RBP0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 SFTPCP11686 197 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 CCNOP22674 350 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 HSPA9P38646 679 aaKnown RBP0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 CD79BP40259 229 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 DYNAPQ8N1N2 210 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 GNB1LQ9BYB4 327 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
RN7SKP287-201ENST00000516546 VWFP04275 2813 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 ZFHX4Q86UP3 3567 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 PRRC2CQ9Y520 2896 aaKnown RBP0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 NEBP20929 6669 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 IGHV1-18A0A0C4DH31 117 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 OTCP00480 354 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 GNA12Q03113 381 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 DAND5Q8N907 189 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 MAT2BQ9NZL9 334 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
RN7SKP287-201ENST00000516546 LAMA2P24043 3122 aaKnown RBP0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 CHD8Q9HCK8 2581 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 STAB1Q9NY15 2570 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 PCLOQ9Y6V0 5065 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 OTOGQ6ZRI0 2925 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 GSTZ1O43708 216 aaPredicted RBP0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 SNAP29O95721 258 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 CA7P43166 264 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 C1DQ13901 141 aaKnown RBP0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 ZNF705AQ6ZN79 300 aaPredicted RBP0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 UBQLN4Q9NRR5 601 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 TGP01266 2768 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 CELSR2Q9HCU4 2923 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 PDZD2O15018 2839 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 APCP25054 2843 aa0.13□□□□□ -2.39
RN7SKP287-201ENST00000516546 CFAP54Q96N23 3096 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 RNF213Q63HN8 5207 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 AKAP13Q12802 2813 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 NIPBLQ6KC79 2804 aaeCLIP0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 COL6A5A8TX70 2615 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 A0A1B0GW15 77 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 OR10J1P30954 320 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 GABRA2P47869 451 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 FLOT2Q14254 428 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 FAM173BQ6P4H8 233 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 DCXRQ7Z4W1 244 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 BCL7BQ9BQE9 202 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 RBMX2Q9Y388 322 aaKnown RBP0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 TIMM9Q9Y5J7 89 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 SNURFQ9Y675 71 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 WDR87Q6ZQQ6 2873 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 NBEAL2Q6ZNJ1 2754 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 TEX15Q9BXT5 2789 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 LAMA3Q16787 3333 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 MGAQ8IWI9 3026 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 CELSR1Q9NYQ6 3014 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 UNC79Q9P2D8 2635 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 C5orf42Q9H799 3197 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 A0A0C4DFX4 3053 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 UBR4Q5T4S7 5183 aa0.12□□□□□ -2.39
RN7SKP287-201ENST00000516546 TENM4Q6N022 2769 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 TENM2Q9NT68 2774 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 ITPR3Q14573 2671 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 HTTP42858 3142 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 REREQ9P2R6 1566 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 RYR1P21817 5038 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 A0A0D9SEW6 157 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 ORC5O43913 435 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 EMP1P54849 157 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 HERVK_113P63121 156 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 USF2Q15853 346 aaPredicted RBP0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 SPATA31B1PQ5VZV4 182 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 LRRC6Q86X45 466 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 CCDC127Q96BQ5 260 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 UGT2B28Q9BY64 529 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 REG4Q9BYZ8 158 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 TTTY13Q9BZ97 58 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 TMEM222Q9H0R3 208 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 FRYLO94915 3013 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 TRANK1O15050 2925 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 SETD2Q9BYW2 2564 aaPredicted RBP0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 CPAMD8Q8IZJ3 1885 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 CENPEQ02224 2701 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 LAMA5O15230 3695 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 MUC3AQ02505 3323 aa0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 TNRC18O15417 2968 aaPredicted RBP0.11□□□□□ -2.39
RN7SKP287-201ENST00000516546 TRIOO75962 3097 aa0.1□□□□□ -2.39
RN7SKP287-201ENST00000516546 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
RN7SKP287-201ENST00000516546 LRBAP50851 2863 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms