RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 FAM131AQ6UXB0 335 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 ZNF491Q8N8L2 437 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 CHMP1AQ9HD42 196 aaPredicted RBP12.62□□□□□ -0.39
LMNA-222ENST00000508500 Q9N2K0 584 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 HSF4Q9ULV5 492 aa12.62□□□□□ -0.39
LMNA-222ENST00000508500 TNCP24821 2201 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 IGKV1-6A0A0C4DH72 117 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 I3L521 148 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 FCN1O00602 326 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 SOX15O60248 233 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 VEGFCP49767 419 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 PPP5CP53041 499 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 LINC00205P59089 165 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 DCTN2Q13561 401 aaKnown RBP12.61□□□□□ -0.39
LMNA-222ENST00000508500 C2orf76Q3KRA6 126 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 LIN54Q6MZP7 749 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 FAM71F2Q6NXP2 309 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 MFSD4AQ8N468 514 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 MINDY2Q8NBR6 621 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 DPF1Q92782 380 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 PTX4Q96A99 478 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 ARHGAP5-AS1Q96IT6 56 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 PECRQ9BY49 303 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 C11orf54Q9H0W9 315 aaPredicted RBP12.61□□□□□ -0.39
LMNA-222ENST00000508500 FBXL15Q9H469 300 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 PARP11Q9NR21 331 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 PIPOXQ9P0Z9 390 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
LMNA-222ENST00000508500 H0YJW9 148 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 ITGB1BP1O14713 200 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 RAB29O14966 203 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 EGR2P11161 476 aaPredicted RBP12.6□□□□□ -0.39
LMNA-222ENST00000508500 TALDO1P37837 337 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 CEACAM6P40199 344 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 RAB11BQ15907 218 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 UBE2NLQ5JXB2 153 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 MOB1BQ7L9L4 216 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 OR11H1Q8NG94 326 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 OR5AN1Q8NGI8 311 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 FAM3DQ96BQ1 224 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 DIRAS2Q96HU8 199 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 UBE2E2Q96LR5 201 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 URM1Q9BTM9 101 aaKnown RBP12.6□□□□□ -0.39
LMNA-222ENST00000508500 MIXL1Q9H2W2 232 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 RIMS4Q9H426 269 aaPredicted RBP12.6□□□□□ -0.39
LMNA-222ENST00000508500 KCNK7Q9Y2U2 307 aa12.6□□□□□ -0.39
LMNA-222ENST00000508500 TRAV41A0A0B4J266 112 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 TMEM272A0A1B0GTI8 110 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 SMIM30A4D0T7 59 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 RRHO14718 337 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 OR5H8P0DN80 308 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 GNB1P62873 340 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 DGCR2P98153 550 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 OR5M8Q8NGP6 311 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 SOSTQ9BQB4 213 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 CCDC32Q9BV29 185 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 GAB2Q9UQC2 676 aa12.59□□□□□ -0.39
LMNA-222ENST00000508500 LSM4Q9Y4Z0 139 aaKnown RBP12.59□□□□□ -0.39
LMNA-222ENST00000508500 HUWE1Q7Z6Z7 4374 aaKnown RBP12.59□□□□□ -0.39
LMNA-222ENST00000508500 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 ZBTB25P24278 435 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 RAB9AP51151 201 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
LMNA-222ENST00000508500 CX3CL1P78423 397 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 RUNX1Q01196 453 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 MOGAT2Q3SYC2 334 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 C9orf66Q5T8R8 295 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 HES5Q5TA89 166 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 SAMD12Q8N8I0 201 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 ZNF383Q8NA42 475 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
LMNA-222ENST00000508500 CASTOR1Q8WTX7 329 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 CMSS1Q9BQ75 279 aaKnown RBP12.58□□□□□ -0.4
LMNA-222ENST00000508500 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
LMNA-222ENST00000508500 KIAA1456Q9P272 454 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
LMNA-222ENST00000508500 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 A6NJ64 397 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 FAM25AB3EWG3 89 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 FAM25CB3EWG5 89 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 FAM25GB3EWG6 89 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 SEC14L6B5MCN3 397 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 HPGDSO60760 199 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 SCGNO76038 276 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 CD3GP09693 182 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 RAB6AP20340 208 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 OR1N2Q8NGR9 330 aa12.57□□□□□ -0.4
LMNA-222ENST00000508500 S100A16Q96FQ6 103 aaKnown RBP12.57□□□□□ -0.4
LMNA-222ENST00000508500 PRR25Q96S07 402 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms