RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 FXYD3Q14802 87 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 ACTBL2Q562R1 376 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 ZNF562Q6V9R5 426 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 OR10R2Q8NGX6 335 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 EDARADDQ8WWZ3 215 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 RAB3CQ96E17 227 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 RHOVQ96L33 236 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 SLC35D1Q9NTN3 355 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 SDHAF2Q9NX18 166 aa10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
NUDCD3-201ENST00000338427 SORL1Q92673 2214 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 ERICH4A6NGS2 130 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 LINC01619G3V211 115 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 RAB27BO00194 218 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 SAP30O75446 220 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 IGLV2-23P01705 113 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 CRYGBP07316 175 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 FCGR3AP08637 254 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 APELAP0DMC3 54 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 SPNP16150 400 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 PSMA1P25786 263 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 TMEM267Q0VDI3 215 aaPredicted RBP10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 AKIRIN2Q53H80 203 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 C22orf42Q6IC83 251 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 CD200R1LQ6Q8B3 271 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 OVCH2Q7RTZ1 564 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 BVESQ8NE79 360 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 GRPEL2Q8TAA5 225 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 ARPC1AQ92747 370 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 FLYWCH2Q96CP2 140 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 WWC2-AS2Q96NR7 200 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 RNF5Q99942 180 aa10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 ZMAT5Q9UDW3 170 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-201ENST00000338427 TRAV1-2A0A0B4J238 106 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 TRDV1A0A1B0GX56 115 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 ANKRD34BA5PLL1 514 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 IFITM5A6NNB3 132 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 RBBP9O75884 186 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 LGALS1P09382 135 aaKnown RBP10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 TPPP2P59282 170 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 MRGPRG-AS1Q2M3A8 158 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 ZNF367Q7RTV3 350 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 OR4A4PQ8NGN8 299 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 TSNAXQ99598 290 aaKnown RBP10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 OR2D2Q9H210 308 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 GHITMQ9H3K2 345 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 ZNF355PQ9NSJ1 428 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 MGAT4AQ9UM21 535 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 U3KQK5 164 aa10.29□□□□□ -0.76
NUDCD3-201ENST00000338427 TRBV6-7A0A0A0MS04 114 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 MFNGO00587 321 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 PDCD5O14737 125 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 CNIH1O95406 144 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 TRGV3P03979 118 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 HSPB1P04792 205 aaKnown RBP10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 RAB3BP20337 219 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 PSMD7P51665 324 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 TBCEQ15813 527 aaPredicted RBP10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 CDNFQ49AH0 187 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 SBSPONQ8IVN8 264 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 OR10J5Q8NHC4 309 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 ATG5Q9H1Y0 275 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 ADAM30Q9UKF2 790 aa10.28□□□□□ -0.76
NUDCD3-201ENST00000338427 TRIM64CA6NLI5 447 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 RBMXL2O75526 392 aaKnown RBP10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 APOA2P02652 100 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 CLEC2LP0C7M8 214 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 HIST1H1DP16402 221 aaKnown RBP10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 MRPS15P82914 257 aaKnown RBP10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 ARFRP1Q13795 201 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 ACSM6Q6P461 480 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 ZNF429Q86V71 674 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 PDPNQ86YL7 162 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 CABLES2Q9BTV7 478 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 ST6GALNAC5Q9BVH7 336 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 NDUFB11Q9NX14 153 aa10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 RBM7Q9Y580 266 aaKnown RBP10.27□□□□□ -0.77
NUDCD3-201ENST00000338427 TENM3Q9P273 2699 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 LINC00473A8K010 186 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 MYL9P24844 172 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 INSL3P51460 131 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 TAGLNQ01995 201 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 IDO2Q6ZQW0 420 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 SPARTQ8N0X7 666 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 TCTEX1D1Q8N7M0 179 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 RNF167Q9H6Y7 350 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 TXNL4BQ9NX01 149 aaKnown RBP10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 SMAD5-AS1Q9Y6J3 95 aa10.26□□□□□ -0.77
NUDCD3-201ENST00000338427 MSGN1A6NI15 193 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 SHOXO15266 292 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 TRBV12-3P01733 135 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 GP9P14770 177 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 RAB6AP20340 208 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 GADD45AP24522 165 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 DUTP33316 252 aaKnown RBP10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 TALDO1P37837 337 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 LGALS7P47929 136 aa10.25□□□□□ -0.77
NUDCD3-201ENST00000338427 SERPINB10P48595 397 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms