RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 FAM131AQ6UXB0 335 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 GLDNQ6ZMI3 551 aaPredicted RBP15.29■□□□□ 0.04
SS18-208ENST00000577751 CENPVQ7Z7K6 275 aaPredicted RBP15.29■□□□□ 0.04
SS18-208ENST00000577751 HOGA1Q86XE5 327 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 COMMD3Q9UBI1 195 aa15.29■□□□□ 0.04
SS18-208ENST00000577751 APOA1P02647 267 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 EIF4EP06730 217 aaKnown RBP15.28■□□□□ 0.04
SS18-208ENST00000577751 GVQW1Q8N7I0 195 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 NPBQ8NG41 125 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 OR5AU1Q8NGC0 362 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 RASL11BQ9BPW5 248 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 OR2D2Q9H210 308 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 SDHAF2Q9NX18 166 aa15.28■□□□□ 0.04
SS18-208ENST00000577751 LINC01548A6NM66 108 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 CNTFRP26992 372 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 RPL5P46777 297 aaKnown RBP15.27■□□□□ 0.04
SS18-208ENST00000577751 LINC00205P59089 165 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 TAS2R20P59543 309 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 CD83Q01151 205 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 MMDQ15546 238 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 TMEM69Q5SWH9 247 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 SLC35E3Q7Z769 313 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 ZNF383Q8NA42 475 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 DRAXINQ8NBI3 349 aaPredicted RBP15.27■□□□□ 0.04
SS18-208ENST00000577751 BEST4Q8NFU0 473 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 WASHC3Q9Y3C0 194 aa15.27■□□□□ 0.04
SS18-208ENST00000577751 NDUFA3O95167 84 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 ZNF182P17025 639 aaPredicted RBP15.26■□□□□ 0.03
SS18-208ENST00000577751 CBX5P45973 191 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 C2orf68Q2NKX9 166 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 TCTEX1D4Q5JR98 221 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 TREML4Q6UXN2 200 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 CLVS1Q8IUQ0 354 aaPredicted RBP15.26■□□□□ 0.03
SS18-208ENST00000577751 C5orf30Q96GV9 206 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 RNF5Q99942 180 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 CITED2Q99967 270 aaPredicted RBP15.26■□□□□ 0.03
SS18-208ENST00000577751 OR2W1Q9Y3N9 320 aa15.26■□□□□ 0.03
SS18-208ENST00000577751 ADARB2-AS1A8MUL3 147 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 M0R1X1 148 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 NBR2O15453 112 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 RBBP9O75884 186 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 TUSC2O75896 110 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 HLA-DQB1P01920 261 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 NFYAP23511 347 aaPredicted RBP15.25■□□□□ 0.03
SS18-208ENST00000577751 TMBIM6P55061 237 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 C10orf99Q6UWK7 81 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 NDUFA11Q86Y39 141 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 FOXRED2Q8IWF2 684 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 RAB2BQ8WUD1 216 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 CHPT1Q8WUD6 406 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 AP3S1Q92572 193 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 SNAPC3Q92966 411 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 NOL4LQ96MY1 436 aaPredicted RBP15.25■□□□□ 0.03
SS18-208ENST00000577751 BCL7BQ9BQE9 202 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 HSPB9Q9BQS6 159 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 ANAPC10Q9UM13 185 aa15.25■□□□□ 0.03
SS18-208ENST00000577751 RBM7Q9Y580 266 aaKnown RBP15.25■□□□□ 0.03
SS18-208ENST00000577751 PKD1L1Q8TDX9 2849 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 H7C2Y5 167 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 KCNAB3O43448 404 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 HPGDSO60760 199 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 TSPAN15O95858 294 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 CSF1P09603 554 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 ELK1P19419 428 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 SOX6P35712 828 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 SPCS2Q15005 226 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 C5orf64Q2M2E5 130 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 MZT2AQ6P582 158 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 PDPNQ86YL7 162 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 STPG2Q8N412 459 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 MMP27Q9H306 513 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 WNK1Q9H4A3 2382 aa15.24■□□□□ 0.03
SS18-208ENST00000577751 PSMB11A5LHX3 300 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 AP4M1O00189 453 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 HLA-DRB1P01911 266 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 IGKV1-16P04430 117 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 LUMP51884 338 aaPredicted RBP15.23■□□□□ 0.03
SS18-208ENST00000577751 ARPC4P59998 168 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 OR5AP2Q8NGF4 316 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 OR4X2Q8NGF9 303 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 ZNF107Q9UII5 783 aaPredicted RBP15.23■□□□□ 0.03
SS18-208ENST00000577751 LINC00527Q9UJ94 153 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 ZNF580Q9UK33 172 aa15.23■□□□□ 0.03
SS18-208ENST00000577751 IGKV1D-13A0A0B4J2D9 117 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 SMIM31A0A1B0GVY4 71 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 MEIS3P1A6NDR6 274 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 RRHO14718 337 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 IGLV2-14P01704 120 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 APOA2P02652 100 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 IGF1P05019 195 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 IGKV1-13P0DP09 117 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 NAT1P18440 290 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 DUTP33316 252 aaKnown RBP15.22■□□□□ 0.03
SS18-208ENST00000577751 PRSS3P35030 304 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 TAGLNQ01995 201 aaKnown RBP15.22■□□□□ 0.03
SS18-208ENST00000577751 LIN54Q6MZP7 749 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 ZNF329Q86UD4 541 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 ZNF645Q8N7E2 425 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 DDB2Q92466 427 aa15.22■□□□□ 0.03
SS18-208ENST00000577751 NECAP2Q9NVZ3 263 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms