RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CNTFRP26992 372 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 MC5RP33032 325 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 SOX6P35712 828 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 CD83Q01151 205 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 FAM71E2Q8N5Q1 922 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 CHPT1Q8WUD6 406 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 S100A16Q96FQ6 103 aaKnown RBP16.34■□□□□ 0.21
CHMP6-204ENST00000572778 OR2D2Q9H210 308 aa16.34■□□□□ 0.21
CHMP6-204ENST00000572778 H0YJW9 148 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 M0R1X1 148 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 NBR2O15453 112 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 OPN1MWP04001 364 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 TFAP2AP05549 437 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 OPN1MW2P0DN77 364 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 OPN1MW3P0DN78 364 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 TCTEX1D4Q5JR98 221 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 UBE2NLQ5JXB2 153 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 SAMD12Q8N8I0 201 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 NAA50Q9GZZ1 169 aaKnown RBP16.33■□□□□ 0.2
CHMP6-204ENST00000572778 KIAA1456Q9P272 454 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 WASHC3Q9Y3C0 194 aa16.33■□□□□ 0.2
CHMP6-204ENST00000572778 J3QRK9 145 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 AP4M1O00189 453 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 KCNAB3O43448 404 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 CTXN2P0C2S0 81 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 LINC00205P59089 165 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 KHDC1LQ5JSQ8 128 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 GPR107Q5VW38 600 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 TET2Q6N021 2002 aaPredicted RBP16.32■□□□□ 0.2
CHMP6-204ENST00000572778 NBEAL1Q6ZS30 2694 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 ANKRD13BQ86YJ7 626 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 H1FOOQ8IZA3 346 aaPredicted RBP16.32■□□□□ 0.2
CHMP6-204ENST00000572778 STPG2Q8N412 459 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.32■□□□□ 0.2
CHMP6-204ENST00000572778 OR5AN1Q8NGI8 311 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 R3HDM4Q96D70 268 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 HSPB9Q9BQS6 159 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 AUNIPQ9H7T9 357 aa16.32■□□□□ 0.2
CHMP6-204ENST00000572778 ADARB2-AS1A8MUL3 147 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 PTHLHP12272 177 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 SLC35B1P78383 322 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 CNIH2Q6PI25 160 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 GPR141Q7Z602 305 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 ZNF383Q8NA42 475 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 KCTD12Q96CX2 325 aaKnown RBP16.31■□□□□ 0.2
CHMP6-204ENST00000572778 SDHAF2Q9NX18 166 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 COMMD3Q9UBI1 195 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 ZNF107Q9UII5 783 aaPredicted RBP16.31■□□□□ 0.2
CHMP6-204ENST00000572778 ANXA10Q9UJ72 324 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 TSSC4Q9Y5U2 329 aaPredicted RBP16.31■□□□□ 0.2
CHMP6-204ENST00000572778 MGAM2Q2M2H8 2515 aa16.31■□□□□ 0.2
CHMP6-204ENST00000572778 XRCC3O43542 346 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 GABARAPO95166 117 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 APOA2P02652 100 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 NFYAP23511 347 aaPredicted RBP16.3■□□□□ 0.2
CHMP6-204ENST00000572778 C5orf64Q2M2E5 130 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 GVQW1Q8N7I0 195 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 NPBQ8NG41 125 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 OR4F17Q8NGA8 305 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 OR4F4Q96R69 305 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 GAB2Q9UQC2 676 aa16.3■□□□□ 0.2
CHMP6-204ENST00000572778 RBBP9O75884 186 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 FCER2P06734 321 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 ALDH3B2P48448 385 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 ARPC4P59998 168 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 PLGLAQ15195 96 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 CTF1Q16619 201 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 LIN54Q6MZP7 749 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 BEST4Q8NFU0 473 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 FBXL15Q9H469 300 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 SLC35D1Q9NTN3 355 aa16.29■□□□□ 0.2
CHMP6-204ENST00000572778 RRHO14718 337 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 NDUFA3O95167 84 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 RORCP51449 518 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 LUMP51884 338 aaPredicted RBP16.28■□□□□ 0.2
CHMP6-204ENST00000572778 RPS16P62249 146 aaKnown RBP16.28■□□□□ 0.2
CHMP6-204ENST00000572778 TMEM69Q5SWH9 247 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 HOGA1Q86XE5 327 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 GON7Q9BXV9 100 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 OR2W1Q9Y3N9 320 aa16.28■□□□□ 0.2
CHMP6-204ENST00000572778 PKD1L1Q8TDX9 2849 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 MEIS3P1A6NDR6 274 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 HLA-DRB1P01911 266 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 IGKV1-16P04430 117 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 VDAC1P21796 283 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 CBX5P45973 191 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 TAS2R20P59543 309 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 PDPNQ86YL7 162 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 COMMD1Q8N668 190 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 ACOT12Q8WYK0 555 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 FLYWCH2Q96CP2 140 aaKnown RBP16.27■□□□□ 0.2
CHMP6-204ENST00000572778 C5orf30Q96GV9 206 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 RNF5Q99942 180 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 PARP11Q9NR21 331 aa16.27■□□□□ 0.2
CHMP6-204ENST00000572778 EIF4EP06730 217 aaKnown RBP16.26■□□□□ 0.19
CHMP6-204ENST00000572778 PF4V1P10720 104 aa16.26■□□□□ 0.19
CHMP6-204ENST00000572778 THBS3P49746 956 aa16.26■□□□□ 0.19
CHMP6-204ENST00000572778 TEX38Q6PEX7 206 aa16.26■□□□□ 0.19
CHMP6-204ENST00000572778 TSNAXQ99598 290 aaKnown RBP16.26■□□□□ 0.19
CHMP6-204ENST00000572778 OR51J1Q9H342 316 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms